List of reports associated
Test name: Version: 5.5.1
Goto: PHPInfo Build environment
PHPInfo
phpinfo()
PHP Version => 5.5.1
System => Linux nebula-7 2.6.32-358.2.1.el6.x86_64 #1 SMP Wed Mar 13 00:26:49 UTC 2013 x86_64
Build Date => Jul 22 2013 16:33:53
Configure Command => './configure' '--prefix=/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1' '--with-pear' '--with-mysql' '--enable-ftp' '--enable-dba=shared' '--with-bz2' '--enable-calendar' '--enable-maintainer-zts' '--enable-zip' '--with-apxs2=/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd-2.4.6/bin/apxs' '--enable-fpm'
Server API => Command Line Interface
Virtual Directory Support => enabled
Configuration File (php.ini) Path => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1/lib
Loaded Configuration File => (none)
Scan this dir for additional .ini files => (none)
Additional .ini files parsed => (none)
PHP API => 20121113
PHP Extension => 20121212
Zend Extension => 220121212
Zend Extension Build => API220121212,TS
PHP Extension Build => API20121212,TS
Debug Build => no
Thread Safety => enabled
Zend Signal Handling => disabled
Zend Memory Manager => enabled
Zend Multibyte Support => disabled
IPv6 Support => enabled
DTrace Support => disabled
Registered PHP Streams => compress.bzip2, php, file, glob, data, http, ftp, phar, zip
Registered Stream Socket Transports => tcp, udp, unix, udg
Registered Stream Filters => bzip2.*, convert.iconv.*, string.rot13, string.toupper, string.tolower, string.strip_tags, convert.*, consumed, dechunk
This program makes use of the Zend Scripting Language Engine:
Zend Engine v2.5.0, Copyright (c) 1998-2013 Zend Technologies
_______________________________________________________________________
Configuration
bz2
BZip2 Support => Enabled
Stream Wrapper support => compress.bzip2://
Stream Filter support => bzip2.decompress, bzip2.compress
BZip2 Version => 1.0.5, 10-Dec-2007
calendar
Calendar support => enabled
Core
PHP Version => 5.5.1
Directive => Local Value => Master Value
allow_url_fopen => On => On
allow_url_include => Off => Off
always_populate_raw_post_data => Off => Off
arg_separator.input => & => &
arg_separator.output => & => &
asp_tags => Off => Off
auto_append_file => no value => no value
auto_globals_jit => On => On
auto_prepend_file => no value => no value
browscap => no value => no value
default_charset => no value => no value
default_mimetype => text/html => text/html
disable_classes => no value => no value
disable_functions => no value => no value
display_errors => STDERR => STDERR
display_startup_errors => Off => Off
doc_root => no value => no value
docref_ext => no value => no value
docref_root => no value => no value
enable_dl => On => On
enable_post_data_reading => On => On
error_append_string => no value => no value
error_log => no value => no value
error_prepend_string => no value => no value
error_reporting => no value => no value
exit_on_timeout => Off => Off
expose_php => On => On
extension_dir => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1/lib/php/extensions/no-debug-zts-20121212 => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1/lib/php/extensions/no-debug-zts-20121212
file_uploads => On => On
highlight.comment => <font style="color: #FF8000">#FF8000</font> => <font style="color: #FF8000">#FF8000</font>
highlight.default => <font style="color: #0000BB">#0000BB</font> => <font style="color: #0000BB">#0000BB</font>
highlight.html => <font style="color: #000000">#000000</font> => <font style="color: #000000">#000000</font>
highlight.keyword => <font style="color: #007700">#007700</font> => <font style="color: #007700">#007700</font>
highlight.string => <font style="color: #DD0000">#DD0000</font> => <font style="color: #DD0000">#DD0000</font>
html_errors => Off => Off
ignore_repeated_errors => Off => Off
ignore_repeated_source => Off => Off
ignore_user_abort => Off => Off
implicit_flush => On => On
include_path => .:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1/lib/php => .:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1/lib/php
log_errors => Off => Off
log_errors_max_len => 1024 => 1024
mail.add_x_header => Off => Off
mail.force_extra_parameters => no value => no value
mail.log => no value => no value
max_execution_time => 0 => 0
max_file_uploads => 20 => 20
max_input_nesting_level => 64 => 64
max_input_time => -1 => -1
max_input_vars => 1000 => 1000
memory_limit => 128M => 128M
open_basedir => no value => no value
output_buffering => 0 => 0
output_handler => no value => no value
post_max_size => 8M => 8M
precision => 14 => 14
realpath_cache_size => 16K => 16K
realpath_cache_ttl => 120 => 120
register_argc_argv => On => On
report_memleaks => On => On
report_zend_debug => Off => Off
request_order => no value => no value
sendmail_from => no value => no value
sendmail_path => /usr/sbin/sendmail -t -i => /usr/sbin/sendmail -t -i
serialize_precision => 17 => 17
short_open_tag => On => On
SMTP => localhost => localhost
smtp_port => 25 => 25
sql.safe_mode => Off => Off
sys_temp_dir => no value => no value
track_errors => Off => Off
unserialize_callback_func => no value => no value
upload_max_filesize => 2M => 2M
upload_tmp_dir => no value => no value
user_dir => no value => no value
user_ini.cache_ttl => 300 => 300
user_ini.filename => .user.ini => .user.ini
variables_order => EGPCS => EGPCS
xmlrpc_error_number => 0 => 0
xmlrpc_errors => Off => Off
zend.detect_unicode => On => On
zend.enable_gc => On => On
zend.multibyte => Off => Off
zend.script_encoding => no value => no value
ctype
ctype functions => enabled
date
date/time support => enabled
"Olson" Timezone Database Version => 2013.4
Timezone Database => internal
Default timezone => UTC
Directive => Local Value => Master Value
date.default_latitude => 31.7667 => 31.7667
date.default_longitude => 35.2333 => 35.2333
date.sunrise_zenith => 90.583333 => 90.583333
date.sunset_zenith => 90.583333 => 90.583333
date.timezone => no value => no value
dom
DOM/XML => enabled
DOM/XML API Version => 20031129
libxml Version => 2.7.6
HTML Support => enabled
XPath Support => enabled
XPointer Support => enabled
Schema Support => enabled
RelaxNG Support => enabled
ereg
Regex Library => Bundled library enabled
fileinfo
fileinfo support => enabled
version => 1.0.5-dev
filter
Input Validation and Filtering => enabled
Revision => $Id: da951feb042dd2911ab6e0971453c070716d068b $
Directive => Local Value => Master Value
filter.default => unsafe_raw => unsafe_raw
filter.default_flags => no value => no value
ftp
FTP support => enabled
hash
hash support => enabled
Hashing Engines => md2 md4 md5 sha1 sha224 sha256 sha384 sha512 ripemd128 ripemd160 ripemd256 ripemd320 whirlpool tiger128,3 tiger160,3 tiger192,3 tiger128,4 tiger160,4 tiger192,4 snefru snefru256 gost adler32 crc32 crc32b fnv132 fnv164 joaat haval128,3 haval160,3 haval192,3 haval224,3 haval256,3 haval128,4 haval160,4 haval192,4 haval224,4 haval256,4 haval128,5 haval160,5 haval192,5 haval224,5 haval256,5
iconv
iconv support => enabled
iconv implementation => glibc
iconv library version => 2.12
Directive => Local Value => Master Value
iconv.input_encoding => ISO-8859-1 => ISO-8859-1
iconv.internal_encoding => ISO-8859-1 => ISO-8859-1
iconv.output_encoding => ISO-8859-1 => ISO-8859-1
json
json support => enabled
json version => 1.2.1
libxml
libXML support => active
libXML Compiled Version => 2.7.6
libXML Loaded Version => 20706
libXML streams => enabled
mysql
MySQL Support => enabled
Active Persistent Links => 0
Active Links => 0
Client API version => mysqlnd 5.0.11-dev - 20120503 - $Id: 40933630edef551dfaca71298a83fad8d03d62d4 $
Directive => Local Value => Master Value
mysql.allow_local_infile => On => On
mysql.allow_persistent => On => On
mysql.connect_timeout => 60 => 60
mysql.default_host => no value => no value
mysql.default_password => no value => no value
mysql.default_port => no value => no value
mysql.default_socket => no value => no value
mysql.default_user => no value => no value
mysql.max_links => Unlimited => Unlimited
mysql.max_persistent => Unlimited => Unlimited
mysql.trace_mode => Off => Off
mysqlnd
mysqlnd => enabled
Version => mysqlnd 5.0.11-dev - 20120503 - $Id: 40933630edef551dfaca71298a83fad8d03d62d4 $
Compression => not supported
core SSL => supported
extended SSL => not supported
Command buffer size => 4096
Read buffer size => 32768
Read timeout => 31536000
Collecting statistics => Yes
Collecting memory statistics => No
Tracing => n/a
Loaded plugins => mysqlnd,debug_trace,auth_plugin_mysql_native_password,auth_plugin_mysql_clear_password
API Extensions => mysql
mysqlnd statistics =>
bytes_sent => 0
bytes_received => 0
packets_sent => 0
packets_received => 0
protocol_overhead_in => 0
protocol_overhead_out => 0
bytes_received_ok_packet => 0
bytes_received_eof_packet => 0
bytes_received_rset_header_packet => 0
bytes_received_rset_field_meta_packet => 0
bytes_received_rset_row_packet => 0
bytes_received_prepare_response_packet => 0
bytes_received_change_user_packet => 0
packets_sent_command => 0
packets_received_ok => 0
packets_received_eof => 0
packets_received_rset_header => 0
packets_received_rset_field_meta => 0
packets_received_rset_row => 0
packets_received_prepare_response => 0
packets_received_change_user => 0
result_set_queries => 0
non_result_set_queries => 0
no_index_used => 0
bad_index_used => 0
slow_queries => 0
buffered_sets => 0
unbuffered_sets => 0
ps_buffered_sets => 0
ps_unbuffered_sets => 0
flushed_normal_sets => 0
flushed_ps_sets => 0
ps_prepared_never_executed => 0
ps_prepared_once_executed => 0
rows_fetched_from_server_normal => 0
rows_fetched_from_server_ps => 0
rows_buffered_from_client_normal => 0
rows_buffered_from_client_ps => 0
rows_fetched_from_client_normal_buffered => 0
rows_fetched_from_client_normal_unbuffered => 0
rows_fetched_from_client_ps_buffered => 0
rows_fetched_from_client_ps_unbuffered => 0
rows_fetched_from_client_ps_cursor => 0
rows_affected_normal => 0
rows_affected_ps => 0
rows_skipped_normal => 0
rows_skipped_ps => 0
copy_on_write_saved => 0
copy_on_write_performed => 0
command_buffer_too_small => 0
connect_success => 0
connect_failure => 0
connection_reused => 0
reconnect => 0
pconnect_success => 0
active_connections => 0
active_persistent_connections => 0
explicit_close => 0
implicit_close => 0
disconnect_close => 0
in_middle_of_command_close => 0
explicit_free_result => 0
implicit_free_result => 0
explicit_stmt_close => 0
implicit_stmt_close => 0
mem_emalloc_count => 0
mem_emalloc_amount => 0
mem_ecalloc_count => 0
mem_ecalloc_amount => 0
mem_erealloc_count => 0
mem_erealloc_amount => 0
mem_efree_count => 0
mem_efree_amount => 0
mem_malloc_count => 0
mem_malloc_amount => 0
mem_calloc_count => 0
mem_calloc_amount => 0
mem_realloc_count => 0
mem_realloc_amount => 0
mem_free_count => 0
mem_free_amount => 0
mem_estrndup_count => 0
mem_strndup_count => 0
mem_estndup_count => 0
mem_strdup_count => 0
proto_text_fetched_null => 0
proto_text_fetched_bit => 0
proto_text_fetched_tinyint => 0
proto_text_fetched_short => 0
proto_text_fetched_int24 => 0
proto_text_fetched_int => 0
proto_text_fetched_bigint => 0
proto_text_fetched_decimal => 0
proto_text_fetched_float => 0
proto_text_fetched_double => 0
proto_text_fetched_date => 0
proto_text_fetched_year => 0
proto_text_fetched_time => 0
proto_text_fetched_datetime => 0
proto_text_fetched_timestamp => 0
proto_text_fetched_string => 0
proto_text_fetched_blob => 0
proto_text_fetched_enum => 0
proto_text_fetched_set => 0
proto_text_fetched_geometry => 0
proto_text_fetched_other => 0
proto_binary_fetched_null => 0
proto_binary_fetched_bit => 0
proto_binary_fetched_tinyint => 0
proto_binary_fetched_short => 0
proto_binary_fetched_int24 => 0
proto_binary_fetched_int => 0
proto_binary_fetched_bigint => 0
proto_binary_fetched_decimal => 0
proto_binary_fetched_float => 0
proto_binary_fetched_double => 0
proto_binary_fetched_date => 0
proto_binary_fetched_year => 0
proto_binary_fetched_time => 0
proto_binary_fetched_datetime => 0
proto_binary_fetched_timestamp => 0
proto_binary_fetched_string => 0
proto_binary_fetched_blob => 0
proto_binary_fetched_enum => 0
proto_binary_fetched_set => 0
proto_binary_fetched_geometry => 0
proto_binary_fetched_other => 0
init_command_executed_count => 0
init_command_failed_count => 0
com_quit => 0
com_init_db => 0
com_query => 0
com_field_list => 0
com_create_db => 0
com_drop_db => 0
com_refresh => 0
com_shutdown => 0
com_statistics => 0
com_process_info => 0
com_connect => 0
com_process_kill => 0
com_debug => 0
com_ping => 0
com_time => 0
com_delayed_insert => 0
com_change_user => 0
com_binlog_dump => 0
com_table_dump => 0
com_connect_out => 0
com_register_slave => 0
com_stmt_prepare => 0
com_stmt_execute => 0
com_stmt_send_long_data => 0
com_stmt_close => 0
com_stmt_reset => 0
com_stmt_set_option => 0
com_stmt_fetch => 0
com_deamon => 0
bytes_received_real_data_normal => 0
bytes_received_real_data_ps => 0
pcre
PCRE (Perl Compatible Regular Expressions) Support => enabled
PCRE Library Version => 8.32 2012-11-30
Directive => Local Value => Master Value
pcre.backtrack_limit => 1000000 => 1000000
pcre.recursion_limit => 100000 => 100000
PDO
PDO support => enabled
PDO drivers => sqlite
pdo_sqlite
PDO Driver for SQLite 3.x => enabled
SQLite Library => 3.7.7.1
Phar
Phar: PHP Archive support => enabled
Phar EXT version => 2.0.1
Phar API version => 1.1.1
SVN revision => $Id: c5042cc34acebcc0926625b57dff03deebbe6472 $
Phar-based phar archives => enabled
Tar-based phar archives => enabled
ZIP-based phar archives => enabled
gzip compression => disabled (install ext/zlib)
bzip2 compression => enabled
OpenSSL support => disabled (install ext/openssl)
Phar based on pear/PHP_Archive, original concept by Davey Shafik.
Phar fully realized by Gregory Beaver and Marcus Boerger.
Portions of tar implementation Copyright (c) 2003-2009 Tim Kientzle.
Directive => Local Value => Master Value
phar.cache_list => no value => no value
phar.readonly => On => On
phar.require_hash => On => On
posix
Revision => $Id: 32db6705f5b617967a546be3114e178a4138c1ca $
Reflection
Reflection => enabled
Version => $Id: b65ccaa26d9194861c2cb2f3f1c8a29fa2f0a788 $
session
Session Support => enabled
Registered save handlers => files user
Registered serializer handlers => php php_binary
Directive => Local Value => Master Value
session.auto_start => Off => Off
session.cache_expire => 180 => 180
session.cache_limiter => nocache => nocache
session.cookie_domain => no value => no value
session.cookie_httponly => Off => Off
session.cookie_lifetime => 0 => 0
session.cookie_path => / => /
session.cookie_secure => Off => Off
session.entropy_file => /dev/urandom => /dev/urandom
session.entropy_length => 32 => 32
session.gc_divisor => 100 => 100
session.gc_maxlifetime => 1440 => 1440
session.gc_probability => 1 => 1
session.hash_bits_per_character => 4 => 4
session.hash_function => 0 => 0
session.name => PHPSESSID => PHPSESSID
session.referer_check => no value => no value
session.save_handler => files => files
session.save_path => no value => no value
session.serialize_handler => php => php
session.upload_progress.cleanup => On => On
session.upload_progress.enabled => On => On
session.upload_progress.freq => 1% => 1%
session.upload_progress.min_freq => 1 => 1
session.upload_progress.name => PHP_SESSION_UPLOAD_PROGRESS => PHP_SESSION_UPLOAD_PROGRESS
session.upload_progress.prefix => upload_progress_ => upload_progress_
session.use_cookies => On => On
session.use_only_cookies => On => On
session.use_trans_sid => 0 => 0
SimpleXML
Simplexml support => enabled
Revision => $Id: e7c2f298447e6fa1f1866acc40773e9db8e75fcc $
Schema support => enabled
SPL
SPL support => enabled
Interfaces => Countable, OuterIterator, RecursiveIterator, SeekableIterator, SplObserver, SplSubject
Classes => AppendIterator, ArrayIterator, ArrayObject, BadFunctionCallException, BadMethodCallException, CachingIterator, CallbackFilterIterator, DirectoryIterator, DomainException, EmptyIterator, FilesystemIterator, FilterIterator, GlobIterator, InfiniteIterator, InvalidArgumentException, IteratorIterator, LengthException, LimitIterator, LogicException, MultipleIterator, NoRewindIterator, OutOfBoundsException, OutOfRangeException, OverflowException, ParentIterator, RangeException, RecursiveArrayIterator, RecursiveCachingIterator, RecursiveCallbackFilterIterator, RecursiveDirectoryIterator, RecursiveFilterIterator, RecursiveIteratorIterator, RecursiveRegexIterator, RecursiveTreeIterator, RegexIterator, RuntimeException, SplDoublyLinkedList, SplFileInfo, SplFileObject, SplFixedArray, SplHeap, SplMinHeap, SplMaxHeap, SplObjectStorage, SplPriorityQueue, SplQueue, SplStack, SplTempFileObject, UnderflowException, UnexpectedValueException
sqlite3
SQLite3 support => enabled
SQLite3 module version => 0.7-dev
SQLite Library => 3.7.7.1
Directive => Local Value => Master Value
sqlite3.extension_dir => no value => no value
standard
Dynamic Library Support => enabled
Path to sendmail => /usr/sbin/sendmail -t -i
Directive => Local Value => Master Value
assert.active => 1 => 1
assert.bail => 0 => 0
assert.callback => no value => no value
assert.quiet_eval => 0 => 0
assert.warning => 1 => 1
auto_detect_line_endings => 0 => 0
default_socket_timeout => 60 => 60
from => no value => no value
url_rewriter.tags => a=href,area=href,frame=src,form=,fieldset= => a=href,area=href,frame=src,form=,fieldset=
user_agent => no value => no value
tokenizer
Tokenizer Support => enabled
xml
XML Support => active
XML Namespace Support => active
libxml2 Version => 2.7.6
xmlreader
XMLReader => enabled
xmlwriter
XMLWriter => enabled
zip
Zip => enabled
Extension Version => $Id: 37a0cdea1913c59443265561810c6f05c3dfc5e0 $
Zip version => 1.11.0
Libzip version => 0.10.1
Additional Modules
Module Name
Environment
Variable => Value
MODULE_OSREVMAJ => 2
MANPATH => /pkg/subversion/1.5.5-centos/man:/pkg/gsu/3.0b/man:/usr/share/man:/auto/sge-6.2u5/man
BEDTOOLS => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin
rvm_bin_path => /home/prigor/.rvm/bin
HOSTNAME => nebula-7
TEST_PHP_SRCDIR => /home/igb-admin/scratch/php-5.5.1
_LMFILES__modshare => /pkg/modules/modulefiles/gsu/3.0b:11:/pkg/modules/modulefiles/subversion/1.5.5:1:/pkg/modules/modulefiles/sge/6.2u5:3
MODULEPATH_modshare => /pkg/modules/modulefiles:8:/usr/share/Modules/modulefiles:1:/etc/modulefiles:1
SHELL => /bin/bash
TERM => screen
MAKEFLAGS =>
HISTSIZE => 5000000000
IGNOREEOF => 3
PSQLLIBS => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/lib
SSH_CLIENT => deleted
MODULE_OSREV => 2.6.32-358.2.1.el6.x86_64
PERL5LIB => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/lib/site_perl/5.16.2
UMASK => 027
CVSROOT => :ext:prigor@contact1.ics.uci.edu:/home/prigor/.cvs_rep
SGE_CELL => uci-ics
MODULE_HOME => /pkg
RNAHYBRID => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin
PERL => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin
OLDPWD => /home/igb-admin/scratch/php-5.5.1
QTDIR => /usr/lib64/qt-3.3
QTINC => /usr/lib64/qt-3.3/include
SSH_TTY => deleted
XTERM => /usr/bin/xterm
ARC => lx24-amd64
HISTFILESIZE => 5000000000
USER => prigor
LS_COLORS => rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.tbz=01;31:*.tbz2=01;31:*.bz=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:
LD_LIBRARY_PATH => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/lib::/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd-2.4.6//lib/apr-util-1/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd-2.4.6//lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd-2.4.6/lib/apr-util-1/:/pkg/subversion/1.5.5-centos/lib:/auto/sge-6.2u5/lib/lx24-amd64
MAILER => /bin/mailx
PSQL => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin
rvm_path => /home/prigor/.rvm
SSH_AUTH_SOCK => deleted
MAKELEVEL => 1
VIRTUAL_ENV => /home/prigor/codebase/pediatrics/deps/inst/virtualenv-centos6
PYTHONLIBS => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib
MFLAGS =>
TMUX => /tmp//tmux-2549/default,2451,0
NODEJSPATH => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/node/bin/
rvm_prefix => /home/prigor
MONGOPATH => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/
PATH => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/node/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd-2.4.6//bin:/pkg/subversion/1.5.5-centos/bin:/home/prigor/codebase/pediatrics/deps/inst/swig/bin:/home/prigor/codebase/pediatrics/deps/inst/virtualenv-centos6/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin:/pkg/gsu/3.0b/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/auto/sge-6.2u5/bin/lx24-amd64:/home/prigor/.rvm/bin
MODULE_OS => Linux
MAIL => /var/spool/mail/prigor
DATABASES => /home/baldig/projects/genomics/crick/databases/
PWD => /home/igb-admin/scratch/php-5.5.1
EXINIT => set redraw shiftwidth=4 showmode wrapmargin=8 tabstop=4
SDM_DIST => /auto/sge-6.2u5
INPUTRC => /etc/inputrc
_LMFILES_ => /pkg/modules/modulefiles/gsu/3.0b:/pkg/modules/modulefiles/sge/6.2u5:/pkg/modules/modulefiles/subversion/1.5.5
MODULE_ARCH => x86_64
EDITOR => vim
SGE_EXECD_PORT => 6547
ROOTLIBS => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/lib
MEME => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin
LANG => en_US.UTF-8
TEST_PHP_EXECUTABLE => /home/igb-admin/scratch/php-5.5.1/sapi/cli/php
MODULEPATH => /pkg/modules/modulefiles:/usr/share/Modules/modulefiles:/etc/modulefiles
MODULE_OSTYPE => BSD
SGE_QMASTER_PORT => 6546
TZ => US/Pacific
SGE_ROOT => /auto/sge-6.2u5
LOADEDMODULES => :gsu/3.0b:ics-default/1.1:sge/6.2u5:subversion/1.5.5
CRICKPATH => /home/prigor/codebase/crick/
TMUX_PANE => %13
PYTHONPY => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib/python2.6
ROOT => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin
HISTCONTROL => ignoreboth
SSH_ASKPASS => /usr/libexec/openssh/gnome-ssh-askpass
rvm_version => 1.21.9 (stable)
HOME => /home/igb-admin
SHLVL => 5
PATH_modshare => /usr/bin:1:/usr/local/bin:1:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin:999999999:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin:999999999:/pkg/subversion/1.5.5-centos/bin:1:/home/prigor/codebase/pediatrics/deps/inst/swig/bin:999999999:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin:999999999:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin:999999999:/bin:1:/pkg/gsu/3.0b/bin:7:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin:999999999:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin:999999999:/sbin:1:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/:999999999:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin:999999999:/usr/sbin:1:/home/prigor/.rvm/bin:999999999:/home/prigor/codebase/pediatrics/deps/inst/virtualenv-centos6/bin:999999999:/auto/sge-6.2u5/bin/lx24-amd64:3:/usr/local/sbin:1:/usr/lib64/qt-3.3/bin:1
SWIG => /home/prigor/codebase/pediatrics/deps/inst/swig
MANPATH_modshare => /pkg/gsu/3.0b/man:7:/pkg/subversion/1.5.5-centos/man:1:/auto/sge-6.2u5/man:3:/usr/share/man:4
APACHEPATH => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd/bin
LOGNAME => prigor
PYTHONPATH => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib/python2.6:/home/prigor/codebase:/home/prigor/codebase/pediatrics/webservices/pedws:/home/prigor/codebase/motifmap/web/motifmapws:/home/prigor/codebase/motifmap/web:/home/prigor/codebase/genomics/trunk/code/python:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib/python2.6:/home/prigor/codebase:/home/prigor/codebase/pediatrics/webservices/pedws:/home/prigor/codebase/motifmap/web/motifmapws:/home/prigor/codebase/motifmap/web:/home/prigor/codebase/genomics/trunk/code/python:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib/python2.6:
VISUAL => vim
QTLIB => /usr/lib64/qt-3.3/lib
CVS_RSH => ssh
LD_LIBRARY_PATH_modshare => /pkg/subversion/1.5.5-centos/lib:1:/auto/sge-6.2u5/lib/lx24-amd64:1
SSH_CONNECTION => deleted
MODULESHOME => /pkg/modules
LESSOPEN => |/usr/bin/lesspipe.sh %s
MYSQLURI => mysql://genomics:genomics@db-igb.ics.uci.edu:5000
LOADEDMODULES_modshare => ics-default/1.1:4::999999999:gsu/3.0b:7:subversion/1.5.5:1:sge/6.2u5:3
MEMELIBS => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/lib
CC => /home/igb-admin/scratch/php-5.5.1/meta_ccld
MODULE_OSREVMIN => 6
G_BROKEN_FILENAMES => 1
PYTHON => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin
HISTFILE => /home/prigor/.bash_history
module => () { eval `'/usr/bin/tclsh' '/pkg/modules/modulecmd.tcl' 'bash' $*`
}
_ => /home/igb-admin/scratch/php-5.5.1/sapi/cli/php
PHP Variables
Variable => Value
_SERVER["MODULE_OSREVMAJ"] => 2
_SERVER["MANPATH"] => /pkg/subversion/1.5.5-centos/man:/pkg/gsu/3.0b/man:/usr/share/man:/auto/sge-6.2u5/man
_SERVER["BEDTOOLS"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin
_SERVER["rvm_bin_path"] => /home/prigor/.rvm/bin
_SERVER["HOSTNAME"] => nebula-7
_SERVER["TEST_PHP_SRCDIR"] => /home/igb-admin/scratch/php-5.5.1
_SERVER["_LMFILES__modshare"] => /pkg/modules/modulefiles/gsu/3.0b:11:/pkg/modules/modulefiles/subversion/1.5.5:1:/pkg/modules/modulefiles/sge/6.2u5:3
_SERVER["MODULEPATH_modshare"] => /pkg/modules/modulefiles:8:/usr/share/Modules/modulefiles:1:/etc/modulefiles:1
_SERVER["SHELL"] => /bin/bash
_SERVER["TERM"] => screen
_SERVER["MAKEFLAGS"] =>
_SERVER["HISTSIZE"] => 5000000000
_SERVER["IGNOREEOF"] => 3
_SERVER["PSQLLIBS"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/lib
_SERVER["SSH_CLIENT"] => deleted
_SERVER["MODULE_OSREV"] => 2.6.32-358.2.1.el6.x86_64
_SERVER["PERL5LIB"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/lib/site_perl/5.16.2
_SERVER["UMASK"] => 027
_SERVER["CVSROOT"] => :ext:prigor@contact1.ics.uci.edu:/home/prigor/.cvs_rep
_SERVER["SGE_CELL"] => uci-ics
_SERVER["MODULE_HOME"] => /pkg
_SERVER["RNAHYBRID"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin
_SERVER["PERL"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin
_SERVER["OLDPWD"] => /home/igb-admin/scratch/php-5.5.1
_SERVER["QTDIR"] => /usr/lib64/qt-3.3
_SERVER["QTINC"] => /usr/lib64/qt-3.3/include
_SERVER["SSH_TTY"] => deleted
_SERVER["XTERM"] => /usr/bin/xterm
_SERVER["ARC"] => lx24-amd64
_SERVER["HISTFILESIZE"] => 5000000000
_SERVER["USER"] => prigor
_SERVER["LS_COLORS"] => rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.tbz=01;31:*.tbz2=01;31:*.bz=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:
_SERVER["LD_LIBRARY_PATH"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/lib::/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd-2.4.6//lib/apr-util-1/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd-2.4.6//lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd-2.4.6/lib/apr-util-1/:/pkg/subversion/1.5.5-centos/lib:/auto/sge-6.2u5/lib/lx24-amd64
_SERVER["MAILER"] => /bin/mailx
_SERVER["PSQL"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin
_SERVER["rvm_path"] => /home/prigor/.rvm
_SERVER["SSH_AUTH_SOCK"] => deleted
_SERVER["MAKELEVEL"] => 1
_SERVER["VIRTUAL_ENV"] => /home/prigor/codebase/pediatrics/deps/inst/virtualenv-centos6
_SERVER["PYTHONLIBS"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib
_SERVER["MFLAGS"] =>
_SERVER["TMUX"] => /tmp//tmux-2549/default,2451,0
_SERVER["NODEJSPATH"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/node/bin/
_SERVER["rvm_prefix"] => /home/prigor
_SERVER["MONGOPATH"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/
_SERVER["PATH"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/node/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd-2.4.6//bin:/pkg/subversion/1.5.5-centos/bin:/home/prigor/codebase/pediatrics/deps/inst/swig/bin:/home/prigor/codebase/pediatrics/deps/inst/virtualenv-centos6/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin:/pkg/gsu/3.0b/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/auto/sge-6.2u5/bin/lx24-amd64:/home/prigor/.rvm/bin
_SERVER["MODULE_OS"] => Linux
_SERVER["MAIL"] => /var/spool/mail/prigor
_SERVER["DATABASES"] => /home/baldig/projects/genomics/crick/databases/
_SERVER["PWD"] => /home/igb-admin/scratch/php-5.5.1
_SERVER["EXINIT"] => set redraw shiftwidth=4 showmode wrapmargin=8 tabstop=4
_SERVER["SDM_DIST"] => /auto/sge-6.2u5
_SERVER["INPUTRC"] => /etc/inputrc
_SERVER["_LMFILES_"] => /pkg/modules/modulefiles/gsu/3.0b:/pkg/modules/modulefiles/sge/6.2u5:/pkg/modules/modulefiles/subversion/1.5.5
_SERVER["MODULE_ARCH"] => x86_64
_SERVER["EDITOR"] => vim
_SERVER["SGE_EXECD_PORT"] => 6547
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_SERVER["MEME"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin
_SERVER["LANG"] => en_US.UTF-8
_SERVER["TEST_PHP_EXECUTABLE"] => /home/igb-admin/scratch/php-5.5.1/sapi/cli/php
_SERVER["MODULEPATH"] => /pkg/modules/modulefiles:/usr/share/Modules/modulefiles:/etc/modulefiles
_SERVER["MODULE_OSTYPE"] => BSD
_SERVER["SGE_QMASTER_PORT"] => 6546
_SERVER["TZ"] => US/Pacific
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_SERVER["LOADEDMODULES"] => :gsu/3.0b:ics-default/1.1:sge/6.2u5:subversion/1.5.5
_SERVER["CRICKPATH"] => /home/prigor/codebase/crick/
_SERVER["TMUX_PANE"] => %13
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_SERVER["HISTCONTROL"] => ignoreboth
_SERVER["SSH_ASKPASS"] => /usr/libexec/openssh/gnome-ssh-askpass
_SERVER["rvm_version"] => 1.21.9 (stable)
_SERVER["HOME"] => /home/igb-admin
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_SERVER["MANPATH_modshare"] => /pkg/gsu/3.0b/man:7:/pkg/subversion/1.5.5-centos/man:1:/auto/sge-6.2u5/man:3:/usr/share/man:4
_SERVER["APACHEPATH"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd/bin
_SERVER["LOGNAME"] => prigor
_SERVER["PYTHONPATH"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib/python2.6:/home/prigor/codebase:/home/prigor/codebase/pediatrics/webservices/pedws:/home/prigor/codebase/motifmap/web/motifmapws:/home/prigor/codebase/motifmap/web:/home/prigor/codebase/genomics/trunk/code/python:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib/python2.6:/home/prigor/codebase:/home/prigor/codebase/pediatrics/webservices/pedws:/home/prigor/codebase/motifmap/web/motifmapws:/home/prigor/codebase/motifmap/web:/home/prigor/codebase/genomics/trunk/code/python:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib/python2.6:
_SERVER["VISUAL"] => vim
_SERVER["QTLIB"] => /usr/lib64/qt-3.3/lib
_SERVER["CVS_RSH"] => ssh
_SERVER["LD_LIBRARY_PATH_modshare"] => /pkg/subversion/1.5.5-centos/lib:1:/auto/sge-6.2u5/lib/lx24-amd64:1
_SERVER["SSH_CONNECTION"] => deleted
_SERVER["MODULESHOME"] => /pkg/modules
_SERVER["LESSOPEN"] => |/usr/bin/lesspipe.sh %s
_SERVER["MYSQLURI"] => mysql://genomics:genomics@db-igb.ics.uci.edu:5000
_SERVER["LOADEDMODULES_modshare"] => ics-default/1.1:4::999999999:gsu/3.0b:7:subversion/1.5.5:1:sge/6.2u5:3
_SERVER["MEMELIBS"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/lib
_SERVER["CC"] => /home/igb-admin/scratch/php-5.5.1/meta_ccld
_SERVER["MODULE_OSREVMIN"] => 6
_SERVER["G_BROKEN_FILENAMES"] => 1
_SERVER["PYTHON"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin
_SERVER["HISTFILE"] => /home/prigor/.bash_history
_SERVER["module"] => () { eval `'/usr/bin/tclsh' '/pkg/modules/modulecmd.tcl' 'bash' $*`
}
_SERVER["_"] => /home/igb-admin/scratch/php-5.5.1/sapi/cli/php
_SERVER["PHP_SELF"] =>
_SERVER["SCRIPT_NAME"] =>
_SERVER["SCRIPT_FILENAME"] =>
_SERVER["PATH_TRANSLATED"] =>
_SERVER["DOCUMENT_ROOT"] =>
_SERVER["REQUEST_TIME_FLOAT"] => 1374537115.3057
_SERVER["REQUEST_TIME"] => 1374537115
_SERVER["argv"] => Array
(
)
_SERVER["argc"] => 0
_ENV["MODULE_OSREVMAJ"] => 2
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_ENV["BEDTOOLS"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin
_ENV["rvm_bin_path"] => /home/prigor/.rvm/bin
_ENV["HOSTNAME"] => nebula-7
_ENV["TEST_PHP_SRCDIR"] => /home/igb-admin/scratch/php-5.5.1
_ENV["_LMFILES__modshare"] => /pkg/modules/modulefiles/gsu/3.0b:11:/pkg/modules/modulefiles/subversion/1.5.5:1:/pkg/modules/modulefiles/sge/6.2u5:3
_ENV["MODULEPATH_modshare"] => /pkg/modules/modulefiles:8:/usr/share/Modules/modulefiles:1:/etc/modulefiles:1
_ENV["SHELL"] => /bin/bash
_ENV["TERM"] => screen
_ENV["MAKEFLAGS"] =>
_ENV["HISTSIZE"] => 5000000000
_ENV["IGNOREEOF"] => 3
_ENV["PSQLLIBS"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/lib
_ENV["SSH_CLIENT"] => deleted
_ENV["MODULE_OSREV"] => 2.6.32-358.2.1.el6.x86_64
_ENV["PERL5LIB"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/lib:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/lib/site_perl/5.16.2
_ENV["UMASK"] => 027
_ENV["CVSROOT"] => :ext:prigor@contact1.ics.uci.edu:/home/prigor/.cvs_rep
_ENV["SGE_CELL"] => uci-ics
_ENV["MODULE_HOME"] => /pkg
_ENV["RNAHYBRID"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin
_ENV["PERL"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin
_ENV["OLDPWD"] => /home/igb-admin/scratch/php-5.5.1
_ENV["QTDIR"] => /usr/lib64/qt-3.3
_ENV["QTINC"] => /usr/lib64/qt-3.3/include
_ENV["SSH_TTY"] => deleted
_ENV["XTERM"] => /usr/bin/xterm
_ENV["ARC"] => lx24-amd64
_ENV["HISTFILESIZE"] => 5000000000
_ENV["USER"] => prigor
_ENV["LS_COLORS"] => rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.tbz=01;31:*.tbz2=01;31:*.bz=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:
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_ENV["MAILER"] => /bin/mailx
_ENV["PSQL"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin
_ENV["rvm_path"] => /home/prigor/.rvm
_ENV["SSH_AUTH_SOCK"] => deleted
_ENV["MAKELEVEL"] => 1
_ENV["VIRTUAL_ENV"] => /home/prigor/codebase/pediatrics/deps/inst/virtualenv-centos6
_ENV["PYTHONLIBS"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/lib
_ENV["MFLAGS"] =>
_ENV["TMUX"] => /tmp//tmux-2549/default,2451,0
_ENV["NODEJSPATH"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/node/bin/
_ENV["rvm_prefix"] => /home/prigor
_ENV["MONGOPATH"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/
_ENV["PATH"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/php-5.5.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/node/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd-2.4.6//bin:/pkg/subversion/1.5.5-centos/bin:/home/prigor/codebase/pediatrics/deps/inst/swig/bin:/home/prigor/codebase/pediatrics/deps/inst/virtualenv-centos6/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/mongodb/bin/:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/perl/5.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/root/5.34.04/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/RNAhybrid/2.1.1/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/BEDTools/2.16.2/bin:/auto/igb-libs/linux/centos/6.x/x86_64/pkgs/postgresql/8.1.23/bin:/pkg/gsu/3.0b/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/auto/sge-6.2u5/bin/lx24-amd64:/home/prigor/.rvm/bin
_ENV["MODULE_OS"] => Linux
_ENV["MAIL"] => /var/spool/mail/prigor
_ENV["DATABASES"] => /home/baldig/projects/genomics/crick/databases/
_ENV["PWD"] => /home/igb-admin/scratch/php-5.5.1
_ENV["EXINIT"] => set redraw shiftwidth=4 showmode wrapmargin=8 tabstop=4
_ENV["SDM_DIST"] => /auto/sge-6.2u5
_ENV["INPUTRC"] => /etc/inputrc
_ENV["_LMFILES_"] => /pkg/modules/modulefiles/gsu/3.0b:/pkg/modules/modulefiles/sge/6.2u5:/pkg/modules/modulefiles/subversion/1.5.5
_ENV["MODULE_ARCH"] => x86_64
_ENV["EDITOR"] => vim
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_ENV["MEME"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/bin
_ENV["LANG"] => en_US.UTF-8
_ENV["TEST_PHP_EXECUTABLE"] => /home/igb-admin/scratch/php-5.5.1/sapi/cli/php
_ENV["MODULEPATH"] => /pkg/modules/modulefiles:/usr/share/Modules/modulefiles:/etc/modulefiles
_ENV["MODULE_OSTYPE"] => BSD
_ENV["SGE_QMASTER_PORT"] => 6546
_ENV["TZ"] => US/Pacific
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_ENV["TMUX_PANE"] => %13
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_ENV["HISTCONTROL"] => ignoreboth
_ENV["SSH_ASKPASS"] => /usr/libexec/openssh/gnome-ssh-askpass
_ENV["rvm_version"] => 1.21.9 (stable)
_ENV["HOME"] => /home/igb-admin
_ENV["SHLVL"] => 5
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_ENV["SWIG"] => /home/prigor/codebase/pediatrics/deps/inst/swig
_ENV["MANPATH_modshare"] => /pkg/gsu/3.0b/man:7:/pkg/subversion/1.5.5-centos/man:1:/auto/sge-6.2u5/man:3:/usr/share/man:4
_ENV["APACHEPATH"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/httpd/bin
_ENV["LOGNAME"] => prigor
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_ENV["VISUAL"] => vim
_ENV["QTLIB"] => /usr/lib64/qt-3.3/lib
_ENV["CVS_RSH"] => ssh
_ENV["LD_LIBRARY_PATH_modshare"] => /pkg/subversion/1.5.5-centos/lib:1:/auto/sge-6.2u5/lib/lx24-amd64:1
_ENV["SSH_CONNECTION"] => deleted
_ENV["MODULESHOME"] => /pkg/modules
_ENV["LESSOPEN"] => |/usr/bin/lesspipe.sh %s
_ENV["MYSQLURI"] => mysql://genomics:genomics@db-igb.ics.uci.edu:5000
_ENV["LOADEDMODULES_modshare"] => ics-default/1.1:4::999999999:gsu/3.0b:7:subversion/1.5.5:1:sge/6.2u5:3
_ENV["MEMELIBS"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/meme/4.9.0/lib
_ENV["CC"] => /home/igb-admin/scratch/php-5.5.1/meta_ccld
_ENV["MODULE_OSREVMIN"] => 6
_ENV["G_BROKEN_FILENAMES"] => 1
_ENV["PYTHON"] => /auto/igb-libs/linux/centos/6.x/x86_64/pkgs/python/2.6.8/bin
_ENV["HISTFILE"] => /home/prigor/.bash_history
_ENV["module"] => () { eval `'/usr/bin/tclsh' '/pkg/modules/modulecmd.tcl' 'bash' $*`
}
_ENV["_"] => /home/igb-admin/scratch/php-5.5.1/sapi/cli/php
PHP License
This program is free software; you can redistribute it and/or modify
it under the terms of the PHP License as published by the PHP Group
and included in the distribution in the file: LICENSE
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
If you did not receive a copy of the PHP license, or have any
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Build environment
OS: Linux - Linux nebula-7 2.6.32-358.2.1.el6.x86_64 #1 SMP Wed Mar 13 00:26:49 UTC 2013 x86_64 Autoconf: autoconf (GNU Autoconf) 2.63 Copyright (C) 2008 Free Software Foundation, Inc. License GPLv2+: GNU GPL version 2 or later <http://gnu.org/licenses/old-licenses/gpl-2.0.html> This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Written by David J. MacKenzie and Akim Demaille. Bundled Libtool: ltmain.sh (GNU libtool) 1.5.26 (1.1220.2.492 2008/01/30 06:40:56) Copyright (C) 2008 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. System Libtool: ltmain.sh (GNU libtool) 2.2.6b Written by Gordon Matzigkeit <gord@gnu.ai.mit.edu>, 1996 Copyright (C) 2008 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Compiler: Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux Thread model: posix gcc version 4.4.7 20120313 (Red Hat 4.4.7-3) (GCC) Bison: bison (GNU Bison) 2.4.1 Written by Robert Corbett and Richard Stallman. Copyright (C) 2008 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Libraries: linux-vdso.so.1 => (0x00007fff7ef48000) libcrypt.so.1 => /lib64/libcrypt.so.1 (0x000000380f400000) libz.so.1 => /lib64/libz.so.1 (0x0000003804800000) libresolv.so.2 => /lib64/libresolv.so.2 (0x0000003805800000) librt.so.1 => /lib64/librt.so.1 (0x0000003804c00000) libbz2.so.1 => /lib64/libbz2.so.1 (0x0000003816800000) libm.so.6 => /lib64/libm.so.6 (0x0000003803800000) libdl.so.2 => /lib64/libdl.so.2 (0x0000003804000000) libnsl.so.1 => /lib64/libnsl.so.1 (0x0000003816400000) libxml2.so.2 => /usr/lib64/libxml2.so.2 (0x000000380ec00000) libpthread.so.0 => /lib64/libpthread.so.0 (0x0000003804400000) libc.so.6 => /lib64/libc.so.6 (0x0000003803c00000) libfreebl3.so => /lib64/libfreebl3.so (0x000000380f800000) /lib64/ld-linux-x86-64.so.2 (0x0000003803400000) User's E-mail: *** (truncated on purpose) ***