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Version: 5.5.6

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PHPInfo

phpinfo()
PHP Version => 5.5.6

System => Darwin ciona.local 13.0.0 Darwin Kernel Version 13.0.0: Thu Sep 19 22:22:27 PDT 2013; root:xnu-2422.1.72~6/RELEASE_X86_64 x86_64
Build Date => Nov 24 2013 06:59:28
Configure Command =>  './configure'  '--prefix=/usr/local' '--with-apxs2=/usr/local/apache/bin/apxs' '--with-openssl=/usr/local/openssl' '--with-libxml-dir=/usr/local/xml2' '--enable-exif' '--enable-ftp' '--enable-sockets' '--enable-safe-mode' '--enable-magic-quotes' '--enable-bcmath' '--with-kerberos' '--enable-wddx' '--enable-shmop' '--with-tsrm-pthreads' '--enable-calendar' '--with-zlib' '--with-zlib-dir=/usr/lib' '--with-freetype-dir=/usr/local/freetype2' '--with-iconv=shared,/usr/local/apr' '--enable-dba' '--with-png-dir=/usr/local/libpng' '--with-xpm-dir=/usr/X11R6/lib' '--with-db4=/usr/local/db' '--enable-debug' '--enable-gd-native-ttf' '--enable-sqlite-utf8' '--with-ldap' '--with-xmlrpc' '--with-curl' '--with-pgsql=/usr/local/pgsql' '--with-pdo-pgsql' '--with-pdo-sqlite' '--with-libexpat-dir=/usr/local/lib' '--with-xsl=/usr/local/xslt' '--with-gettext=/usr/local/gettext' '--with-bz2' '--enable-sysvmsg' '--enable-sysvsem' '--enable-sysvshm' '--with-mysqli=/usr/local/mysql/bin/mysql_config' '--enable-mbstring' '--with-mysql=/usr/local/mysql'
Server API => Command Line Interface
Virtual Directory Support => disabled
Configuration File (php.ini) Path => /usr/local/lib
Loaded Configuration File => /usr/local/lib/php.ini
Scan this dir for additional .ini files => (none)
Additional .ini files parsed => (none)
PHP API => 20121113
PHP Extension => 20121212
Zend Extension => 220121212
Zend Extension Build => API220121212,NTS,debug
PHP Extension Build => API20121212,NTS,debug
Debug Build => yes
Thread Safety => disabled
Zend Signal Handling => disabled
Zend Memory Manager => enabled
Zend Multibyte Support => provided by mbstring
IPv6 Support => enabled
DTrace Support => disabled

Registered PHP Streams => https, ftps, compress.zlib, compress.bzip2, php, file, glob, data, http, ftp, phar
Registered Stream Socket Transports => tcp, udp, unix, udg, ssl, sslv3, sslv2, tls
Registered Stream Filters => zlib.*, bzip2.*, string.rot13, string.toupper, string.tolower, string.strip_tags, convert.*, consumed, dechunk

This program makes use of the Zend Scripting Language Engine:
Zend Engine v2.5.0, Copyright (c) 1998-2013 Zend Technologies


 _______________________________________________________________________


Configuration

bcmath

BCMath support => enabled

Directive => Local Value => Master Value
bcmath.scale => 0 => 0

bz2

BZip2 Support => Enabled
Stream Wrapper support => compress.bzip2://
Stream Filter support => bzip2.decompress, bzip2.compress
BZip2 Version => 1.0.6, 6-Sept-2010

calendar

Calendar support => enabled

Core

PHP Version => 5.5.6

Directive => Local Value => Master Value
allow_url_fopen => On => On
allow_url_include => Off => Off
always_populate_raw_post_data => Off => Off
arg_separator.input => & => &
arg_separator.output => & => &
asp_tags => Off => Off
auto_append_file => no value => no value
auto_globals_jit => On => On
auto_prepend_file => no value => no value
browscap => no value => no value
default_charset => no value => no value
default_mimetype => text/html => text/html
disable_classes => no value => no value
disable_functions => no value => no value
display_errors => STDERR => STDERR
display_startup_errors => On => On
doc_root => no value => no value
docref_ext => no value => no value
docref_root => no value => no value
enable_dl => Off => Off
enable_post_data_reading => On => On
error_append_string => no value => no value
error_log => no value => no value
error_prepend_string => no value => no value
error_reporting => 32767 => 32767
exit_on_timeout => Off => Off
expose_php => On => On
extension_dir => /usr/local/lib/php/extensions/debug-non-zts-20121212 => /usr/local/lib/php/extensions/debug-non-zts-20121212
file_uploads => On => On
highlight.comment => <font style="color: #FF8000">#FF8000</font> => <font style="color: #FF8000">#FF8000</font>
highlight.default => <font style="color: #0000BB">#0000BB</font> => <font style="color: #0000BB">#0000BB</font>
highlight.html => <font style="color: #000000">#000000</font> => <font style="color: #000000">#000000</font>
highlight.keyword => <font style="color: #007700">#007700</font> => <font style="color: #007700">#007700</font>
highlight.string => <font style="color: #DD0000">#DD0000</font> => <font style="color: #DD0000">#DD0000</font>
html_errors => Off => Off
ignore_repeated_errors => Off => Off
ignore_repeated_source => Off => Off
ignore_user_abort => Off => Off
implicit_flush => On => On
include_path => .:/usr/local/lib/php => .:/usr/local/lib/php
log_errors => On => On
log_errors_max_len => 1024 => 1024
mail.add_x_header => On => On
mail.force_extra_parameters => no value => no value
mail.log => no value => no value
max_execution_time => 0 => 0
max_file_uploads => 20 => 20
max_input_nesting_level => 64 => 64
max_input_time => -1 => -1
max_input_vars => 1000 => 1000
memory_limit => 128M => 128M
open_basedir => no value => no value
output_buffering => 0 => 0
output_handler => no value => no value
post_max_size => 8M => 8M
precision => 14 => 14
realpath_cache_size => 16K => 16K
realpath_cache_ttl => 120 => 120
register_argc_argv => On => On
report_memleaks => On => On
report_zend_debug => Off => Off
request_order => GP => GP
sendmail_from => no value => no value
sendmail_path => /usr/sbin/sendmail -t -i  => /usr/sbin/sendmail -t -i 
serialize_precision => 17 => 17
short_open_tag => Off => Off
SMTP => localhost => localhost
smtp_port => 25 => 25
sql.safe_mode => Off => Off
sys_temp_dir => no value => no value
track_errors => On => On
unserialize_callback_func => no value => no value
upload_max_filesize => 2M => 2M
upload_tmp_dir => no value => no value
user_dir => no value => no value
user_ini.cache_ttl => 300 => 300
user_ini.filename => .user.ini => .user.ini
variables_order => GPCS => GPCS
xmlrpc_error_number => 0 => 0
xmlrpc_errors => Off => Off
zend.detect_unicode => On => On
zend.enable_gc => On => On
zend.multibyte => Off => Off
zend.script_encoding => no value => no value

ctype

ctype functions => enabled

curl

cURL support => enabled
cURL Information => 7.30.0
Age => 3
Features
AsynchDNS => Yes
CharConv => No
Debug => No
GSS-Negotiate => Yes
IDN => No
IPv6 => Yes
krb4 => No
Largefile => Yes
libz => Yes
NTLM => Yes
NTLMWB => Yes
SPNEGO => No
SSL => Yes
SSPI => No
TLS-SRP => No
Protocols => dict, file, ftp, ftps, gopher, http, https, imap, imaps, ldap, ldaps, pop3, pop3s, rtsp, smtp, smtps, telnet, tftp
Host => x86_64-apple-darwin13.0
SSL Version => SecureTransport
ZLib Version => 1.2.5

date

date/time support => enabled
"Olson" Timezone Database Version => 2013.8
Timezone Database => internal
Default timezone => UTC

Directive => Local Value => Master Value
date.default_latitude => 31.7667 => 31.7667
date.default_longitude => 35.2333 => 35.2333
date.sunrise_zenith => 90.583333 => 90.583333
date.sunset_zenith => 90.583333 => 90.583333
date.timezone => no value => no value

dba

DBA support => enabled
Supported handlers => cdb cdb_make db4 inifile flatfile 

Directive => Local Value => Master Value
dba.default_handler => flatfile => flatfile

dom

DOM/XML => enabled
DOM/XML API Version => 20031129
libxml Version => 2.9.0
HTML Support => enabled
XPath Support => enabled
XPointer Support => enabled
Schema Support => enabled
RelaxNG Support => enabled

ereg

Regex Library => Bundled library enabled

exif

EXIF Support => enabled
EXIF Version => 1.4 $Id$
Supported EXIF Version => 0220
Supported filetypes => JPEG,TIFF

Directive => Local Value => Master Value
exif.decode_jis_intel => JIS => JIS
exif.decode_jis_motorola => JIS => JIS
exif.decode_unicode_intel => UCS-2LE => UCS-2LE
exif.decode_unicode_motorola => UCS-2BE => UCS-2BE
exif.encode_jis => no value => no value
exif.encode_unicode => ISO-8859-15 => ISO-8859-15

fileinfo

fileinfo support => enabled
version => 1.0.5-dev

filter

Input Validation and Filtering => enabled
Revision => $Id: 12aebcf366f801ceeae618aefd4383fef24e701b $

Directive => Local Value => Master Value
filter.default => unsafe_raw => unsafe_raw
filter.default_flags => no value => no value

ftp

FTP support => enabled

gettext

GetText Support => enabled

hash

hash support => enabled
Hashing Engines => md2 md4 md5 sha1 sha224 sha256 sha384 sha512 ripemd128 ripemd160 ripemd256 ripemd320 whirlpool tiger128,3 tiger160,3 tiger192,3 tiger128,4 tiger160,4 tiger192,4 snefru snefru256 gost adler32 crc32 crc32b fnv132 fnv164 joaat haval128,3 haval160,3 haval192,3 haval224,3 haval256,3 haval128,4 haval160,4 haval192,4 haval224,4 haval256,4 haval128,5 haval160,5 haval192,5 haval224,5 haval256,5 

json

json support => enabled
json version => 1.2.1

ldap

LDAP Support => enabled
RCS Version => $Id$
Total Links => 0/unlimited
API Version => 3001
Vendor Name => OpenLDAP
Vendor Version => 20428

Directive => Local Value => Master Value
ldap.max_links => Unlimited => Unlimited

libxml

libXML support => active
libXML Compiled Version => 2.9.0
libXML Loaded Version => 20900
libXML streams => enabled

mbstring

Multibyte Support => enabled
Multibyte string engine => libmbfl
HTTP input encoding translation => disabled
libmbfl version => 1.3.2

mbstring extension makes use of "streamable kanji code filter and converter", which is distributed under the GNU Lesser General Public License version 2.1.

Multibyte (japanese) regex support => enabled
Multibyte regex (oniguruma) backtrack check => On
Multibyte regex (oniguruma) version => 5.9.2

Directive => Local Value => Master Value
mbstring.detect_order => no value => no value
mbstring.encoding_translation => Off => Off
mbstring.func_overload => 0 => 0
mbstring.http_input => pass => pass
mbstring.http_output => pass => pass
mbstring.http_output_conv_mimetypes => ^(text/|application/xhtml\+xml) => ^(text/|application/xhtml\+xml)
mbstring.internal_encoding => no value => no value
mbstring.language => neutral => neutral
mbstring.strict_detection => Off => Off
mbstring.substitute_character => no value => no value

mysql

MySQL Support => enabled
Active Persistent Links => 0
Active Links => 0
Client API version => 5.6.13
MYSQL_MODULE_TYPE => external
MYSQL_SOCKET => /tmp/mysql.sock
MYSQL_INCLUDE => -I/usr/local/mysql/include
MYSQL_LIBS => -L/usr/local/mysql/lib -lmysqlclient 

Directive => Local Value => Master Value
mysql.allow_local_infile => On => On
mysql.allow_persistent => On => On
mysql.connect_timeout => 60 => 60
mysql.default_host => no value => no value
mysql.default_password => no value => no value
mysql.default_port => no value => no value
mysql.default_socket => /tmp/mysql.sock => /tmp/mysql.sock
mysql.default_user => no value => no value
mysql.max_links => Unlimited => Unlimited
mysql.max_persistent => Unlimited => Unlimited
mysql.trace_mode => Off => Off

mysqli

MysqlI Support => enabled
Client API library version => 5.6.13
Active Persistent Links => 0
Inactive Persistent Links => 0
Active Links => 0
Client API header version => 5.6.13
MYSQLI_SOCKET => /tmp/mysql.sock

Directive => Local Value => Master Value
mysqli.allow_local_infile => On => On
mysqli.allow_persistent => On => On
mysqli.default_host => no value => no value
mysqli.default_port => 3306 => 3306
mysqli.default_pw => no value => no value
mysqli.default_socket => no value => no value
mysqli.default_user => no value => no value
mysqli.max_links => Unlimited => Unlimited
mysqli.max_persistent => Unlimited => Unlimited
mysqli.reconnect => Off => Off

openssl

OpenSSL support => enabled
OpenSSL Library Version => OpenSSL 1.0.1b 26 Apr 2012
OpenSSL Header Version => OpenSSL 1.0.1b 26 Apr 2012

pcre

PCRE (Perl Compatible Regular Expressions) Support => enabled
PCRE Library Version => 8.32 2012-11-30

Directive => Local Value => Master Value
pcre.backtrack_limit => 1000000 => 1000000
pcre.recursion_limit => 100000 => 100000

PDO

PDO support => enabled
PDO drivers => pgsql, sqlite

pdo_pgsql

PDO Driver for PostgreSQL => enabled
PostgreSQL(libpq) Version => 9.3.1
Module version => 1.0.2
Revision =>  $Id$ 

pdo_sqlite

PDO Driver for SQLite 3.x => enabled
SQLite Library => 3.7.7.1

pgsql

PostgreSQL Support => enabled
PostgreSQL(libpq) Version => 9.3.1
PostgreSQL(libpq)  => PostgreSQL 9.3.1 on x86_64-apple-darwin12.5.0, compiled by i686-apple-darwin11-llvm-gcc-4.2 (GCC) 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2336.11.00), 64-bit
Multibyte character support => enabled
SSL support => enabled
Active Persistent Links => 0
Active Links => 0

Directive => Local Value => Master Value
pgsql.allow_persistent => On => On
pgsql.auto_reset_persistent => Off => Off
pgsql.ignore_notice => Off => Off
pgsql.log_notice => Off => Off
pgsql.max_links => Unlimited => Unlimited
pgsql.max_persistent => Unlimited => Unlimited

Phar

Phar: PHP Archive support => enabled
Phar EXT version => 2.0.2
Phar API version => 1.1.1
SVN revision => $Id: 13b3d6428e324aa0041694ace9992641a0f48ed8 $
Phar-based phar archives => enabled
Tar-based phar archives => enabled
ZIP-based phar archives => enabled
gzip compression => enabled
bzip2 compression => enabled
OpenSSL support => enabled


Phar based on pear/PHP_Archive, original concept by Davey Shafik.
Phar fully realized by Gregory Beaver and Marcus Boerger.
Portions of tar implementation Copyright (c) 2003-2009 Tim Kientzle.
Directive => Local Value => Master Value
phar.cache_list => no value => no value
phar.readonly => On => On
phar.require_hash => On => On

posix

Revision => $Id: 32db6705f5b617967a546be3114e178a4138c1ca $

Reflection

Reflection => enabled
Version => $Id: b1f7484f243ca1baeb64560b43b1927e7279dc80 $

session

Session Support => enabled
Registered save handlers => files user 
Registered serializer handlers => php_serialize php php_binary wddx 

Directive => Local Value => Master Value
session.auto_start => Off => Off
session.cache_expire => 180 => 180
session.cache_limiter => nocache => nocache
session.cookie_domain => no value => no value
session.cookie_httponly => Off => Off
session.cookie_lifetime => 0 => 0
session.cookie_path => / => /
session.cookie_secure => Off => Off
session.entropy_file => no value => no value
session.entropy_length => 0 => 0
session.gc_divisor => 1000 => 1000
session.gc_maxlifetime => 1440 => 1440
session.gc_probability => 1 => 1
session.hash_bits_per_character => 5 => 5
session.hash_function => 0 => 0
session.name => PHPSESSID => PHPSESSID
session.referer_check => no value => no value
session.save_handler => files => files
session.save_path => no value => no value
session.serialize_handler => php => php
session.upload_progress.cleanup => On => On
session.upload_progress.enabled => On => On
session.upload_progress.freq => 1% => 1%
session.upload_progress.min_freq => 1 => 1
session.upload_progress.name => PHP_SESSION_UPLOAD_PROGRESS => PHP_SESSION_UPLOAD_PROGRESS
session.upload_progress.prefix => upload_progress_ => upload_progress_
session.use_cookies => On => On
session.use_only_cookies => On => On
session.use_strict_mode => Off => Off
session.use_trans_sid => 0 => 0

shmop

shmop support => enabled

SimpleXML

Simplexml support => enabled
Revision => $Id: eba46b909103648e33046d39de5d9de73bc28162 $
Schema support => enabled

sockets

Sockets Support => enabled

SPL

SPL support => enabled
Interfaces => Countable, OuterIterator, RecursiveIterator, SeekableIterator, SplObserver, SplSubject
Classes => AppendIterator, ArrayIterator, ArrayObject, BadFunctionCallException, BadMethodCallException, CachingIterator, CallbackFilterIterator, DirectoryIterator, DomainException, EmptyIterator, FilesystemIterator, FilterIterator, GlobIterator, InfiniteIterator, InvalidArgumentException, IteratorIterator, LengthException, LimitIterator, LogicException, MultipleIterator, NoRewindIterator, OutOfBoundsException, OutOfRangeException, OverflowException, ParentIterator, RangeException, RecursiveArrayIterator, RecursiveCachingIterator, RecursiveCallbackFilterIterator, RecursiveDirectoryIterator, RecursiveFilterIterator, RecursiveIteratorIterator, RecursiveRegexIterator, RecursiveTreeIterator, RegexIterator, RuntimeException, SplDoublyLinkedList, SplFileInfo, SplFileObject, SplFixedArray, SplHeap, SplMinHeap, SplMaxHeap, SplObjectStorage, SplPriorityQueue, SplQueue, SplStack, SplTempFileObject, UnderflowException, UnexpectedValueException

sqlite3

SQLite3 support => enabled
SQLite3 module version => 0.7-dev
SQLite Library => 3.7.7.1

Directive => Local Value => Master Value
sqlite3.extension_dir => no value => no value

standard

Dynamic Library Support => enabled
Path to sendmail => /usr/sbin/sendmail -t -i 

Directive => Local Value => Master Value
assert.active => 1 => 1
assert.bail => 0 => 0
assert.callback => no value => no value
assert.quiet_eval => 0 => 0
assert.warning => 1 => 1
auto_detect_line_endings => 0 => 0
default_socket_timeout => 60 => 60
from => no value => no value
url_rewriter.tags => a=href,area=href,frame=src,input=src,form=fakeentry => a=href,area=href,frame=src,input=src,form=fakeentry
user_agent => no value => no value

sysvmsg

sysvmsg support => enabled
Revision => $Id: a57e25e6c32775fb53ad02fa294f63e934911815 $

tokenizer

Tokenizer Support => enabled

wddx

WDDX Support => enabled
WDDX Session Serializer => enabled

xml

XML Support => active
XML Namespace Support => active
EXPAT Version => expat_2.1.0

xmlreader

XMLReader => enabled

xmlrpc

core library version => xmlrpc-epi v. 0.51
php extension version => 0.51
author => Dan Libby
homepage => http://xmlrpc-epi.sourceforge.net
open sourced by => Epinions.com

xmlwriter

XMLWriter => enabled

xsl

XSL => enabled
libxslt Version => 1.1.28
libxslt compiled against libxml Version => 2.9.0
EXSLT => enabled
libexslt Version => 1.1.28

zlib

ZLib Support => enabled
Stream Wrapper => compress.zlib://
Stream Filter => zlib.inflate, zlib.deflate
Compiled Version => 1.2.7
Linked Version => 1.2.3

Directive => Local Value => Master Value
zlib.output_compression => Off => Off
zlib.output_compression_level => -1 => -1
zlib.output_handler => no value => no value

Additional Modules

Module Name
sysvsem
sysvshm

Environment

Variable => Value
REMOTEHOST =>  
MANPATH => /usr/local/openssl/man:/opt/perl/man:/usr/share/man:/usr/local/man:/usr/local/share/man:/usr/X11R6/man:/usr/local/apache/man:/usr/local/gnupg/man:/usr/local/mysql/man:/usr/local/xml2/man:/usr/local/openssl/man:/usr/local/pgsql/man:/usr/local/subversion/man
TERM_PROGRAM => Apple_Terminal
TEST_PHP_SRCDIR => /Users/efrangul/Softwares/php-5.5.6
SHELL => /bin/tcsh
TERM => xterm-256color
HOST => ciona.local
WISECONFIGDIR => /Users/efrangul/local/bioinfo/wise/wisecfg
CATALINA_HOME => /Library/Tomcat
MAKEFLAGS =>  
SSH_CLIENT => deleted
TMPDIR => /tmp
Apple_PubSub_Socket_Render => /tmp/launch-GNoQsd/Render
TERM_PROGRAM_VERSION => 326
BLASTDIR => /Users/efrangul/local/bioinfo/blast
LAGAN_DIR => /Users/efrangul/local/bioinfo/lagan
TERM_SESSION_ID => E31993AD-A26C-4C7E-9602-11D30C934F6F
CHESSDIR => /Users/efrangul/Chess
SSH_TTY => deleted
GNUTERMAPP => /usr/local/Applications/AquaTerm.app
ANT_HOME => /usr/local/ant
BIOINFODIR => /Users/efrangul/local/bioinfo
PROG_TOP => /Users/efrangul/programs
USER => efrangul
GROUP => staff
LD_LIBRARY_PATH => /usr/local/ant/lib:/opt/oracle/10.2.0.4.0/lib:/opt/oracle/10.2.0.4.0/rdbms/lib:/usr/local/maven/lib:/usr/local/lib:/usr/local/freetype2/lib:/usr/local/gd/lib:/usr/X11R6/lib:/opt/X11/lib:/usr/local/apache/lib:/opt/perl/lib:/usr/local/xml2/lib:/usr/local/openldap/lib:/usr/local/wine/lib:/usr/local/gnupg/lib:/usr/local/db/lib:/usr/local/pgsql/lib:/usr/local/openssl/lib:/usr/local/sqlite/lib:/usr/local/xslt/lib:/usr/local/gnupg/lib:/usr/local/lib/gettext:/usr/local/neon/lib:/usr/local/libtool/lib:/usr/local/lpr/lib:/usr/local/apr/lib:/usr/local/icu/lib:/usr/local/subversion/lib:/usr/local/fontconfig/lib::/usr/local/libffi/lib:/usr/lib
SRCHOME => /opt/oracle/10.2.0.4.0
ORACLE_SID => DGIAV
SSH_AUTH_SOCK => deleted
HOSTTYPE => intel-mac
__CF_USER_TEXT_ENCODING => 0x1F5:0:0
MATRIXDIR => /Users/efrangul/local/bioinfo/matrix
MAKELEVEL => 1
MFLAGS =>  
__CHECKFIX1436934 => 1
PATH => /opt/oracle/10.2.0.4.0/bin:/Library/Tomcat/bin:/Users/efrangul/local/bioinfo/wise/bin:/Users/efrangul/local/bioinfo/lagan/bin:/System/Library/Frameworks/JavaVM.framework/Home/bin:/usr/local/wine/bin:/usr/local/gnupg/bin:/usr/local/openldap/bin:/Users/efrangul/local/bioinfo/blast/bin:/usr/local/pgsql/bin:/usr/local/openssl/bin:/usr/local/db/bin:/usr/local/sqlite/bin:/usr/local/xslt/bin:/usr/local/gnupg/bin:/usr/local/gettext/bin:/usr/local/neon/bin:/usr/local/gd/bin:/usr/local/ant/bin:/usr/local/libtool/bin:/usr/local/apr/bin:/usr/local/icu/bin:/usr/local/subversion/bin:/usr/local/fontconfig/bin:/usr/local/pcre/bin:/usr/local/mercurial/bin:/usr/local/maven/bin:/usr/local/git/bin:/usr/local/play:/usr/local/re2c/bin:/opt/perl/bin:/usr/local/apache/bin:/usr/local/subversion/bin:/usr/local/xml2/bin:/usr/local/bin:/sbin:/usr/sbin:/bin:/usr/bin:/usr/X11R6/bin:/Users/efrangul/local/bin:/usr/local/mysql/bin:/usr/local/db/bin
TCOFFEEDIR => /Users/efrangul/local/bioinfo/t_coffee
_ => /Users/efrangul/Softwares/php-5.5.6/sapi/cli/php
CLUSTALDIR => /Users/efrangul/local/bioinfo/clustalw
PWD => /Users/efrangul/Softwares/php-5.5.6
CAC40_DATA => /Users/efrangul/programs
JAVA_HOME => /System/Library/Frameworks/JavaVM.framework/Home
EDITOR => vi
LANG => en_CA.UTF-8
TEST_PHP_EXECUTABLE => /Users/efrangul/Softwares/php-5.5.6/sapi/cli/php
BLASTDB => /Users/efrangul/local/bioinfo/db
WISEDIR => /Users/efrangul/local/bioinfo/wise
HOME => /Users/efrangul
M2_HOME => /usr/local/maven
SHLVL => 3
OSTYPE => darwin
CONFDIR => /Users/efrangul/programs/perl
VENDOR => apple
GNUTERM => aqua
MACHTYPE => x86_64
MACOSX_DEPLOYMENT_TARGET => 10.9
LOGNAME => efrangul
PICTUREDIR => /Users/efrangul/programs/perl/pictures
SSH_CONNECTION => deleted
CLASSPATH => /opt/oracle/10.2.0.4.0/jdbc/lib/classes12.zip:.:/Library/Tomcat/common/lib/servlet-api.jar:/Library/Tomcat/server/lib/jakarta-regexp-1.4.jar:/Users/efrangul/local/bioinfo/vista/Vista.jar:/Users/efrangul/local/bioinfo/vista/retepPDF2.jar:/usr/local/cruisecontrol/lib/mail.jar:/usr/local/cruisecontrol/lib/activation.jar
EMACSDIR => /Users/efrangul/.emacs_file
SCRIPTDIR => /Users/efrangul/programs/perl
PKG_CONFIG => /usr/local/bin/pkg-config
PKG_CONFIG_PATH => /usr/local/xslt/lib/pkgconfig:/usr/local/xml2/lib/pkgconfig:/usr/local/apache/lib/pkgconfig:/usr/local/apr/lib/pkgconfig:/usr/local/freetype2/lib/pkgconfig:/usr/local/neon/lib/pkgconfig:/usr/local/openssl/lib/pkgconfig:/usr/local/sqlite/lib/pkgconfig:/usr/local/fontconfig/lib/pkgconfig::/usr/local/libffi/lib/pkgconfig:/usr/local/lib/pkgconfig
VISTA_DIR => /Users/efrangul/local/bioinfo/vista
RESULTDIR => /tmp
EMAIL => efrangul@mac.com
DISPLAY => /tmp/launch-hpmKmF/org.macosforge.xquartz:0
CC => cc
ORACLE_HOME => /opt/oracle/10.2.0.4.0
BASEDIR => /Library/Tomcat
SECURITYSESSIONID => 186a4
HTTP_SERVER => http://localhost:9090
XTERM_OPTS => -T ciona.local@efrangul -n ciona.local@efrangul 

PHP Variables

Variable => Value
_SERVER["REMOTEHOST"] => 
_SERVER["MANPATH"] => /usr/local/openssl/man:/opt/perl/man:/usr/share/man:/usr/local/man:/usr/local/share/man:/usr/X11R6/man:/usr/local/apache/man:/usr/local/gnupg/man:/usr/local/mysql/man:/usr/local/xml2/man:/usr/local/openssl/man:/usr/local/pgsql/man:/usr/local/subversion/man
_SERVER["TERM_PROGRAM"] => Apple_Terminal
_SERVER["TEST_PHP_SRCDIR"] => /Users/efrangul/Softwares/php-5.5.6
_SERVER["SHELL"] => /bin/tcsh
_SERVER["TERM"] => xterm-256color
_SERVER["HOST"] => ciona.local
_SERVER["WISECONFIGDIR"] => /Users/efrangul/local/bioinfo/wise/wisecfg
_SERVER["CATALINA_HOME"] => /Library/Tomcat
_SERVER["MAKEFLAGS"] => 
_SERVER["SSH_CLIENT"] => deleted
_SERVER["TMPDIR"] => /tmp
_SERVER["Apple_PubSub_Socket_Render"] => /tmp/launch-GNoQsd/Render
_SERVER["TERM_PROGRAM_VERSION"] => 326
_SERVER["BLASTDIR"] => /Users/efrangul/local/bioinfo/blast
_SERVER["LAGAN_DIR"] => /Users/efrangul/local/bioinfo/lagan
_SERVER["TERM_SESSION_ID"] => E31993AD-A26C-4C7E-9602-11D30C934F6F
_SERVER["CHESSDIR"] => /Users/efrangul/Chess
_SERVER["SSH_TTY"] => deleted
_SERVER["GNUTERMAPP"] => /usr/local/Applications/AquaTerm.app
_SERVER["ANT_HOME"] => /usr/local/ant
_SERVER["BIOINFODIR"] => /Users/efrangul/local/bioinfo
_SERVER["PROG_TOP"] => /Users/efrangul/programs
_SERVER["USER"] => efrangul
_SERVER["GROUP"] => staff
_SERVER["LD_LIBRARY_PATH"] => /usr/local/ant/lib:/opt/oracle/10.2.0.4.0/lib:/opt/oracle/10.2.0.4.0/rdbms/lib:/usr/local/maven/lib:/usr/local/lib:/usr/local/freetype2/lib:/usr/local/gd/lib:/usr/X11R6/lib:/opt/X11/lib:/usr/local/apache/lib:/opt/perl/lib:/usr/local/xml2/lib:/usr/local/openldap/lib:/usr/local/wine/lib:/usr/local/gnupg/lib:/usr/local/db/lib:/usr/local/pgsql/lib:/usr/local/openssl/lib:/usr/local/sqlite/lib:/usr/local/xslt/lib:/usr/local/gnupg/lib:/usr/local/lib/gettext:/usr/local/neon/lib:/usr/local/libtool/lib:/usr/local/lpr/lib:/usr/local/apr/lib:/usr/local/icu/lib:/usr/local/subversion/lib:/usr/local/fontconfig/lib::/usr/local/libffi/lib:/usr/lib
_SERVER["SRCHOME"] => /opt/oracle/10.2.0.4.0
_SERVER["ORACLE_SID"] => DGIAV
_SERVER["SSH_AUTH_SOCK"] => deleted
_SERVER["HOSTTYPE"] => intel-mac
_SERVER["__CF_USER_TEXT_ENCODING"] => 0x1F5:0:0
_SERVER["MATRIXDIR"] => /Users/efrangul/local/bioinfo/matrix
_SERVER["MAKELEVEL"] => 1
_SERVER["MFLAGS"] => 
_SERVER["__CHECKFIX1436934"] => 1
_SERVER["PATH"] => /opt/oracle/10.2.0.4.0/bin:/Library/Tomcat/bin:/Users/efrangul/local/bioinfo/wise/bin:/Users/efrangul/local/bioinfo/lagan/bin:/System/Library/Frameworks/JavaVM.framework/Home/bin:/usr/local/wine/bin:/usr/local/gnupg/bin:/usr/local/openldap/bin:/Users/efrangul/local/bioinfo/blast/bin:/usr/local/pgsql/bin:/usr/local/openssl/bin:/usr/local/db/bin:/usr/local/sqlite/bin:/usr/local/xslt/bin:/usr/local/gnupg/bin:/usr/local/gettext/bin:/usr/local/neon/bin:/usr/local/gd/bin:/usr/local/ant/bin:/usr/local/libtool/bin:/usr/local/apr/bin:/usr/local/icu/bin:/usr/local/subversion/bin:/usr/local/fontconfig/bin:/usr/local/pcre/bin:/usr/local/mercurial/bin:/usr/local/maven/bin:/usr/local/git/bin:/usr/local/play:/usr/local/re2c/bin:/opt/perl/bin:/usr/local/apache/bin:/usr/local/subversion/bin:/usr/local/xml2/bin:/usr/local/bin:/sbin:/usr/sbin:/bin:/usr/bin:/usr/X11R6/bin:/Users/efrangul/local/bin:/usr/local/mysql/bin:/usr/local/db/bin
_SERVER["TCOFFEEDIR"] => /Users/efrangul/local/bioinfo/t_coffee
_SERVER["_"] => /Users/efrangul/Softwares/php-5.5.6/sapi/cli/php
_SERVER["CLUSTALDIR"] => /Users/efrangul/local/bioinfo/clustalw
_SERVER["PWD"] => /Users/efrangul/Softwares/php-5.5.6
_SERVER["CAC40_DATA"] => /Users/efrangul/programs
_SERVER["JAVA_HOME"] => /System/Library/Frameworks/JavaVM.framework/Home
_SERVER["EDITOR"] => vi
_SERVER["LANG"] => en_CA.UTF-8
_SERVER["TEST_PHP_EXECUTABLE"] => /Users/efrangul/Softwares/php-5.5.6/sapi/cli/php
_SERVER["BLASTDB"] => /Users/efrangul/local/bioinfo/db
_SERVER["WISEDIR"] => /Users/efrangul/local/bioinfo/wise
_SERVER["HOME"] => /Users/efrangul
_SERVER["M2_HOME"] => /usr/local/maven
_SERVER["SHLVL"] => 3
_SERVER["OSTYPE"] => darwin
_SERVER["CONFDIR"] => /Users/efrangul/programs/perl
_SERVER["VENDOR"] => apple
_SERVER["GNUTERM"] => aqua
_SERVER["MACHTYPE"] => x86_64
_SERVER["MACOSX_DEPLOYMENT_TARGET"] => 10.9
_SERVER["LOGNAME"] => efrangul
_SERVER["PICTUREDIR"] => /Users/efrangul/programs/perl/pictures
_SERVER["SSH_CONNECTION"] => deleted
_SERVER["CLASSPATH"] => /opt/oracle/10.2.0.4.0/jdbc/lib/classes12.zip:.:/Library/Tomcat/common/lib/servlet-api.jar:/Library/Tomcat/server/lib/jakarta-regexp-1.4.jar:/Users/efrangul/local/bioinfo/vista/Vista.jar:/Users/efrangul/local/bioinfo/vista/retepPDF2.jar:/usr/local/cruisecontrol/lib/mail.jar:/usr/local/cruisecontrol/lib/activation.jar
_SERVER["EMACSDIR"] => /Users/efrangul/.emacs_file
_SERVER["SCRIPTDIR"] => /Users/efrangul/programs/perl
_SERVER["PKG_CONFIG"] => /usr/local/bin/pkg-config
_SERVER["PKG_CONFIG_PATH"] => /usr/local/xslt/lib/pkgconfig:/usr/local/xml2/lib/pkgconfig:/usr/local/apache/lib/pkgconfig:/usr/local/apr/lib/pkgconfig:/usr/local/freetype2/lib/pkgconfig:/usr/local/neon/lib/pkgconfig:/usr/local/openssl/lib/pkgconfig:/usr/local/sqlite/lib/pkgconfig:/usr/local/fontconfig/lib/pkgconfig::/usr/local/libffi/lib/pkgconfig:/usr/local/lib/pkgconfig
_SERVER["VISTA_DIR"] => /Users/efrangul/local/bioinfo/vista
_SERVER["RESULTDIR"] => /tmp
_SERVER["EMAIL"] => efrangul@mac.com
_SERVER["DISPLAY"] => /tmp/launch-hpmKmF/org.macosforge.xquartz:0
_SERVER["CC"] => cc
_SERVER["ORACLE_HOME"] => /opt/oracle/10.2.0.4.0
_SERVER["BASEDIR"] => /Library/Tomcat
_SERVER["SECURITYSESSIONID"] => 186a4
_SERVER["HTTP_SERVER"] => http://localhost:9090
_SERVER["XTERM_OPTS"] => -T ciona.local@efrangul -n ciona.local@efrangul 
_SERVER["PHP_SELF"] => 
_SERVER["SCRIPT_NAME"] => 
_SERVER["SCRIPT_FILENAME"] => 
_SERVER["PATH_TRANSLATED"] => 
_SERVER["DOCUMENT_ROOT"] => 
_SERVER["REQUEST_TIME_FLOAT"] => 1385295613.6384
_SERVER["REQUEST_TIME"] => 1385295613
_SERVER["argv"] => Array
(
)

_SERVER["argc"] => 0

PHP License
This program is free software; you can redistribute it and/or modify
it under the terms of the PHP License as published by the PHP Group
and included in the distribution in the file:  LICENSE

This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

If you did not receive a copy of the PHP license, or have any
questions about PHP licensing, please contact license@php.net.

Build environment

OS:
Darwin - Darwin ciona.local 13.0.0 Darwin Kernel Version 13.0.0: Thu Sep 19 22:22:27 PDT 2013; root:xnu-2422.1.72~6/RELEASE_X86_64 x86_64

Autoconf:
autoconf (GNU Autoconf) 2.69
Copyright (C) 2012 Free Software Foundation, Inc.
License GPLv3+/Autoconf: GNU GPL version 3 or later
<http://gnu.org/licenses/gpl.html>, <http://gnu.org/licenses/exceptions.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.

Written by David J. MacKenzie and Akim Demaille.

Bundled Libtool:
ltmain.sh (GNU libtool) 1.5.26 (1.1220.2.492 2008/01/30 06:40:56)

Copyright (C) 2008  Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

System Libtool:
libtool (GNU libtool) 2.4
Written by Gordon Matzigkeit <gord@gnu.ai.mit.edu>, 1996

Copyright (C) 2010 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

Compiler:
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix

Bison:
bison (GNU Bison) 2.3
Written by Robert Corbett and Richard Stallman.

Copyright (C) 2006 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

Libraries:


User's E-mail: *** (truncated on purpose) ***