List of reports associated
Test name: Version: 7.4.6
Goto: PHPInfo Build environment
PHPInfo
phpinfo()
PHP Version => 7.4.6
System => Linux ksl 3.10.0-862.14.4.el7.x86_64 #1 SMP Wed Sep 26 15:12:11 UTC 2018 x86_64
Build Date => May 26 2020 14:52:03
Configure Command => './configure' 'PKG_CONFIG_PATH=/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig'
Server API => Command Line Interface
Virtual Directory Support => disabled
Configuration File (php.ini) Path => /usr/local/lib
Loaded Configuration File => (none)
Scan this dir for additional .ini files => (none)
Additional .ini files parsed => (none)
PHP API => 20190902
PHP Extension => 20190902
Zend Extension => 320190902
Zend Extension Build => API320190902,NTS
PHP Extension Build => API20190902,NTS
Debug Build => no
Thread Safety => disabled
Zend Signal Handling => enabled
Zend Memory Manager => enabled
Zend Multibyte Support => disabled
IPv6 Support => enabled
DTrace Support => disabled
Registered PHP Streams => php, file, glob, data, http, ftp, phar
Registered Stream Socket Transports => tcp, udp, unix, udg
Registered Stream Filters => convert.iconv.*, string.rot13, string.toupper, string.tolower, string.strip_tags, convert.*, consumed, dechunk
This program makes use of the Zend Scripting Language Engine:
Zend Engine v3.4.0, Copyright (c) Zend Technologies
_______________________________________________________________________
Configuration
Core
PHP Version => 7.4.6
Directive => Local Value => Master Value
allow_url_fopen => On => On
allow_url_include => Off => Off
arg_separator.input => & => &
arg_separator.output => & => &
auto_append_file => no value => no value
auto_globals_jit => On => On
auto_prepend_file => no value => no value
browscap => no value => no value
default_charset => UTF-8 => UTF-8
default_mimetype => text/html => text/html
disable_classes => no value => no value
disable_functions => no value => no value
display_errors => STDERR => STDERR
display_startup_errors => Off => Off
doc_root => no value => no value
docref_ext => no value => no value
docref_root => no value => no value
enable_dl => On => On
enable_post_data_reading => On => On
error_append_string => no value => no value
error_log => no value => no value
error_prepend_string => no value => no value
error_reporting => no value => no value
expose_php => On => On
extension_dir => /usr/local/lib/php/extensions/no-debug-non-zts-20190902 => /usr/local/lib/php/extensions/no-debug-non-zts-20190902
file_uploads => On => On
hard_timeout => 2 => 2
highlight.comment => <font style="color: #FF8000">#FF8000</font> => <font style="color: #FF8000">#FF8000</font>
highlight.default => <font style="color: #0000BB">#0000BB</font> => <font style="color: #0000BB">#0000BB</font>
highlight.html => <font style="color: #000000">#000000</font> => <font style="color: #000000">#000000</font>
highlight.keyword => <font style="color: #007700">#007700</font> => <font style="color: #007700">#007700</font>
highlight.string => <font style="color: #DD0000">#DD0000</font> => <font style="color: #DD0000">#DD0000</font>
html_errors => Off => Off
ignore_repeated_errors => Off => Off
ignore_repeated_source => Off => Off
ignore_user_abort => Off => Off
implicit_flush => On => On
include_path => .: => .:
input_encoding => no value => no value
internal_encoding => no value => no value
log_errors => Off => Off
log_errors_max_len => 1024 => 1024
mail.add_x_header => Off => Off
mail.force_extra_parameters => no value => no value
mail.log => no value => no value
max_execution_time => 0 => 0
max_file_uploads => 20 => 20
max_input_nesting_level => 64 => 64
max_input_time => -1 => -1
max_input_vars => 1000 => 1000
memory_limit => 128M => 128M
open_basedir => no value => no value
output_buffering => 0 => 0
output_encoding => no value => no value
output_handler => no value => no value
post_max_size => 8M => 8M
precision => 14 => 14
realpath_cache_size => 4096K => 4096K
realpath_cache_ttl => 120 => 120
register_argc_argv => On => On
report_memleaks => On => On
report_zend_debug => Off => Off
request_order => no value => no value
sendmail_from => no value => no value
sendmail_path => /usr/sbin/sendmail -t -i => /usr/sbin/sendmail -t -i
serialize_precision => -1 => -1
short_open_tag => On => On
SMTP => localhost => localhost
smtp_port => 25 => 25
sys_temp_dir => no value => no value
syslog.facility => LOG_USER => LOG_USER
syslog.filter => no-ctrl => no-ctrl
syslog.ident => php => php
track_errors => Off => Off
unserialize_callback_func => no value => no value
upload_max_filesize => 2M => 2M
upload_tmp_dir => no value => no value
user_dir => no value => no value
user_ini.cache_ttl => 300 => 300
user_ini.filename => .user.ini => .user.ini
variables_order => EGPCS => EGPCS
xmlrpc_error_number => 0 => 0
xmlrpc_errors => Off => Off
zend.assertions => 1 => 1
zend.detect_unicode => On => On
zend.enable_gc => On => On
zend.exception_ignore_args => Off => Off
zend.multibyte => Off => Off
zend.script_encoding => no value => no value
zend.signal_check => Off => Off
ctype
ctype functions => enabled
date
date/time support => enabled
timelib version => 2018.03
"Olson" Timezone Database Version => 2020.1
Timezone Database => internal
Default timezone => UTC
Directive => Local Value => Master Value
date.default_latitude => 31.7667 => 31.7667
date.default_longitude => 35.2333 => 35.2333
date.sunrise_zenith => 90.583333 => 90.583333
date.sunset_zenith => 90.583333 => 90.583333
date.timezone => no value => no value
dom
DOM/XML => enabled
DOM/XML API Version => 20031129
libxml Version => 2.9.1
HTML Support => enabled
XPath Support => enabled
XPointer Support => enabled
Schema Support => enabled
RelaxNG Support => enabled
fileinfo
fileinfo support => enabled
libmagic => 537
filter
Input Validation and Filtering => enabled
Directive => Local Value => Master Value
filter.default => unsafe_raw => unsafe_raw
filter.default_flags => no value => no value
hash
hash support => enabled
Hashing Engines => md2 md4 md5 sha1 sha224 sha256 sha384 sha512/224 sha512/256 sha512 sha3-224 sha3-256 sha3-384 sha3-512 ripemd128 ripemd160 ripemd256 ripemd320 whirlpool tiger128,3 tiger160,3 tiger192,3 tiger128,4 tiger160,4 tiger192,4 snefru snefru256 gost gost-crypto adler32 crc32 crc32b crc32c fnv132 fnv1a32 fnv164 fnv1a64 joaat haval128,3 haval160,3 haval192,3 haval224,3 haval256,3 haval128,4 haval160,4 haval192,4 haval224,4 haval256,4 haval128,5 haval160,5 haval192,5 haval224,5 haval256,5
iconv
iconv support => enabled
iconv implementation => glibc
iconv library version => 2.17
Directive => Local Value => Master Value
iconv.input_encoding => no value => no value
iconv.internal_encoding => no value => no value
iconv.output_encoding => no value => no value
json
json support => enabled
libxml
libXML support => active
libXML Compiled Version => 2.9.1
libXML Loaded Version => 20901
libXML streams => enabled
pcre
PCRE (Perl Compatible Regular Expressions) Support => enabled
PCRE Library Version => 10.34 2019-11-21
PCRE Unicode Version => 12.1.0
PCRE JIT Support => enabled
PCRE JIT Target => x86 64bit (little endian + unaligned)
Directive => Local Value => Master Value
pcre.backtrack_limit => 1000000 => 1000000
pcre.jit => 1 => 1
pcre.recursion_limit => 100000 => 100000
PDO
PDO support => enabled
PDO drivers => sqlite
pdo_sqlite
PDO Driver for SQLite 3.x => enabled
SQLite Library => 3.7.17
Phar
Phar: PHP Archive support => enabled
Phar API version => 1.1.1
Phar-based phar archives => enabled
Tar-based phar archives => enabled
ZIP-based phar archives => enabled
gzip compression => disabled (install ext/zlib)
bzip2 compression => disabled (install ext/bz2)
OpenSSL support => disabled (install ext/openssl)
Phar based on pear/PHP_Archive, original concept by Davey Shafik.
Phar fully realized by Gregory Beaver and Marcus Boerger.
Portions of tar implementation Copyright (c) 2003-2009 Tim Kientzle.
Directive => Local Value => Master Value
phar.cache_list => no value => no value
phar.readonly => On => On
phar.require_hash => On => On
posix
POSIX support => enabled
Reflection
Reflection => enabled
session
Session Support => enabled
Registered save handlers => files user
Registered serializer handlers => php_serialize php php_binary
Directive => Local Value => Master Value
session.auto_start => Off => Off
session.cache_expire => 180 => 180
session.cache_limiter => nocache => nocache
session.cookie_domain => no value => no value
session.cookie_httponly => 0 => 0
session.cookie_lifetime => 0 => 0
session.cookie_path => / => /
session.cookie_samesite => no value => no value
session.cookie_secure => 0 => 0
session.gc_divisor => 100 => 100
session.gc_maxlifetime => 1440 => 1440
session.gc_probability => 1 => 1
session.lazy_write => On => On
session.name => PHPSESSID => PHPSESSID
session.referer_check => no value => no value
session.save_handler => files => files
session.save_path => no value => no value
session.serialize_handler => php => php
session.sid_bits_per_character => 4 => 4
session.sid_length => 32 => 32
session.upload_progress.cleanup => On => On
session.upload_progress.enabled => On => On
session.upload_progress.freq => 1% => 1%
session.upload_progress.min_freq => 1 => 1
session.upload_progress.name => PHP_SESSION_UPLOAD_PROGRESS => PHP_SESSION_UPLOAD_PROGRESS
session.upload_progress.prefix => upload_progress_ => upload_progress_
session.use_cookies => 1 => 1
session.use_only_cookies => 1 => 1
session.use_strict_mode => 0 => 0
session.use_trans_sid => 0 => 0
SimpleXML
SimpleXML support => enabled
Schema support => enabled
SPL
SPL support => enabled
Interfaces => OuterIterator, RecursiveIterator, SeekableIterator, SplObserver, SplSubject
Classes => AppendIterator, ArrayIterator, ArrayObject, BadFunctionCallException, BadMethodCallException, CachingIterator, CallbackFilterIterator, DirectoryIterator, DomainException, EmptyIterator, FilesystemIterator, FilterIterator, GlobIterator, InfiniteIterator, InvalidArgumentException, IteratorIterator, LengthException, LimitIterator, LogicException, MultipleIterator, NoRewindIterator, OutOfBoundsException, OutOfRangeException, OverflowException, ParentIterator, RangeException, RecursiveArrayIterator, RecursiveCachingIterator, RecursiveCallbackFilterIterator, RecursiveDirectoryIterator, RecursiveFilterIterator, RecursiveIteratorIterator, RecursiveRegexIterator, RecursiveTreeIterator, RegexIterator, RuntimeException, SplDoublyLinkedList, SplFileInfo, SplFileObject, SplFixedArray, SplHeap, SplMinHeap, SplMaxHeap, SplObjectStorage, SplPriorityQueue, SplQueue, SplStack, SplTempFileObject, UnderflowException, UnexpectedValueException
sqlite3
SQLite3 support => enabled
SQLite Library => 3.7.17
Directive => Local Value => Master Value
sqlite3.extension_dir => no value => no value
standard
Dynamic Library Support => enabled
Path to sendmail => /usr/sbin/sendmail -t -i
Directive => Local Value => Master Value
assert.active => 1 => 1
assert.bail => 0 => 0
assert.callback => no value => no value
assert.exception => 0 => 0
assert.quiet_eval => 0 => 0
assert.warning => 1 => 1
auto_detect_line_endings => 0 => 0
default_socket_timeout => 60 => 60
from => no value => no value
session.trans_sid_hosts => no value => no value
session.trans_sid_tags => a=href,area=href,frame=src,form= => a=href,area=href,frame=src,form=
unserialize_max_depth => 4096 => 4096
url_rewriter.hosts => no value => no value
url_rewriter.tags => form= => form=
user_agent => no value => no value
tokenizer
Tokenizer Support => enabled
xml
XML Support => active
XML Namespace Support => active
libxml2 Version => 2.9.1
xmlreader
XMLReader => enabled
xmlwriter
XMLWriter => enabled
Additional Modules
Module Name
Environment
Variable => Value
MKLROOT => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl
CONDA_BACKUP_DEBUG_CXXFLAGS => -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -fno-plt -Og -g -Wall -Wextra -fvar-tracking-assignments -ffunction-sections -pipe
MANPATH => /man:/opt/sge/man:/opt/intel/man/common:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/man:/opt/intel/documentation_2018/en/debugger//gdb-ia/man/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/man/:/man:/opt/sge/man:/opt/intel/man/common:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/man:/opt/intel/documentation_2018/en/debugger//gdb-ia/man/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/man/:/usr/local/share/man:/usr/share/man/overrides:/usr/share/man::
CONDA_BACKUP_RANLIB => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ranlib
COILSDIR => /home/programms/rgaugury/coils
CONDA_BACKUP_FORTRANFLAGS => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
XDG_SESSION_ID => 11456
HOSTNAME => ksl
TEST_PHP_SRCDIR => /home/programms/php-7.4.6
INTEL_LICENSE_FILE => /opt/intel/compilers_and_libraries_2018.3.222/linux/licenses:/opt/intel/licenses:/root/intel/licenses:/opt/intel/compilers_and_libraries_2018.3.222/linux/licenses:/opt/intel/licenses:/root/intel/licenses
IPPROOT => /opt/intel/compilers_and_libraries_2018.3.222/linux/ipp
CONDA_BACKUP_FFLAGS => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
SHELL => /bin/bash
RNASEQ => /home/programms/tools/RNA_seq_analysis
TERM => xterm-256color
HOST => x86_64-conda_cos6-linux-gnu
CONDA_BACKUP_CXXFILT => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-c++filt
MAKEFLAGS =>
HISTSIZE => 1000
CONDA_BACKUP_AR => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ar
CONDA_BACKUP_GXX => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-g++
SSH_CLIENT => deleted
GDBSERVER_MIC => /opt/intel/debugger_2018/gdb/targets/intel64/x200/bin/gdbserver
TEST_PHPDBG_EXECUTABLE => /home/programms/php-7.4.6/sapi/phpdbg/phpdbg
LIBRARY_PATH => /opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/../tbb/lib/intel64_lin/gcc4.4
PERL5LIB => :/home/programms/PfamScan:/home/programms/PfamScan
CONDA_BACKUP_AS => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-as
CONDA_SHLVL => 0
SGE_CELL => default
PFAMDB => /home/programms/PfamScan
SGE_ARCH => lx-amd64
QTDIR => /usr/lib64/qt-3.3
CONDA_BACKUP_LD => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ld
SCIPIO => /home/programms/scipio-1.4
CONDA_BACKUP_STRIP => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-strip
QTINC => /usr/lib64/qt-3.3/include
SSH_TTY => deleted
QT_GRAPHICSSYSTEM_CHECKED => 1
CONDA_BACKUP_DEBUG_CPPFLAGS => -D_DEBUG -D_FORTIFY_SOURCE=2 -Og
BAMTOOLS_PATH => /usr/local/bin
USER => root
LS_COLORS => rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arc=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lha=38;5;9:*.lz4=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.tzo=38;5;9:*.t7z=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lrz=38;5;9:*.lz=38;5;9:*.lzo=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.bz=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.war=38;5;9:*.ear=38;5;9:*.sar=38;5;9:*.rar=38;5;9:*.alz=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.cab=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.webm=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45:
GENEMARK_PATH => /home/programms/FunGAP/external/gm_et_linux_64/gmes_petap
LD_LIBRARY_PATH => /lib:/usr/local/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/debugger_2018/iga/lib:/opt/intel/debugger_2018/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/lib:/usr/local/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/debugger_2018/iga/lib:/opt/intel/debugger_2018/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/../tbb/lib/intel64_lin/gcc4.4
CONDA_BACKUP_GCC_NM => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc-nm
CONDA_BACKUP_SIZE => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-size
CONDA_BACKUP_F77 => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
CONDA_BACKUP_HOST => x86_64-conda_cos6-linux-gnu
PSTLROOT => /opt/intel/compilers_and_libraries_2018.3.222/linux/pstl
CONDA_BACKUP_F95 => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-f95
CONDA_EXE => /root/anaconda3/bin/conda
CONDA_BACKUP_GPROF => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gprof
SSH_AUTH_SOCK => deleted
CPATH => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/pstl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/pstl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/include
AUGUSTUS_SCRIPTS_PATH => /home/programms/augustus/scripts
MAKELEVEL => 1
MSM_PRODUCT => RWC2
CONDA_BACKUP_LDFLAGS => -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections
MFLAGS =>
TOOLDIR => /home/programms/tools
_CE_CONDA =>
CONDA_BACKUP_CXX => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-c++
NLSPATH => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2018/gdb/intel64/share/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2018/gdb/intel64/share/locale/%l_%t/%N
PATH => /bin:/opt/sge/bin:/opt/sge/bin/lx-amd64:/opt/intel/compilers_and_libraries_2018.3.222/linux/bin/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin:/root/anaconda3/condabin:/bin:/opt/sge/bin:/opt/sge/bin/lx-amd64:/opt/intel/compilers_and_libraries_2018.3.222/linux/bin/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin:/usr/lib64/qt-3.3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/home/programms/velvet:/home/programms/oases:/home/programms/Sibelia/build:/home/programms/tools/samtools:/home/programms/tools/bcftools:/home/programms/tools/tabix:/home/programms/SOAPdenovo2:/home/programms/hmmer/src:/home/programms/RepeatMasker:/home/programms/masurca/MaSuRCA-3.2.8/bin:/home/programms/CMake/bin:/home/programms/bamtools/build/src/toolkit:/home/programms/augustus-3.3.2/src:/home/programms/interproscan:/home/programms/mcl-14-137/bin:/home/programms/minimap2:/home/programms/miniasm:/home/programms/racon/build/bin:/home/programms/canu/Linux-amd64/bin:/home/programms/hisat2:/home/programms/cufflinks:/home/programms/abyss/bin:/home/programms/transabyss:/home/programms/BLAT:/home/programms/bowtie2:/home/programms/STAR/bin/Linux_x86_64:/home/programms/spades/bin:/home/programms/pilon:/home/programms/gmes_petap:/home/programms/meth_progs_dist/src:/home/programms/StringTie:/home/programms/sqlite-tools-linux-x86-3290000:/home/programms/gmap-2017-11-15/util:/home/programms/PASApipeline-v2.3.3/bin:/home/programms/fasta-36.3.8g/bin:/home/programms/centrifuge-1.0.3-beta:/home/programms/wtdbg2:/home/programms/talesf:/home/programms/promoter-2.0:/home/programms/lin:/home/programms/NECAT/Linux-amd64/bin:/home/programms/LongQC/minimap2_mod:/home/programms/phobius:/home/programms/rgaugury:/home/programms/rgaugury/coils:/home/programms/interproscan:/home/programms/PfamScan:/home/programms/CViT:/home/programms/bwa:/home/programms/fastxtend/bin:/home/programms/pHMM/pHMM-Tree:/home/programms/canu/Linux-amd64/bin:/home/programms/salmon/bin:/home/programms/jellyfish/bin:/home/programms/augustus/bin:/home/programms/hal/bin:/usr/lib/jvm/java-1.8.0-openjdk/jre/bin:/root/bin:/home/programms/velvet:/home/programms/oases:/home/programms/Sibelia/build:/home/programms/tools/samtools:/home/programms/tools/bcftools:/home/programms/tools/tabix:/home/programms/SOAPdenovo2:/home/programms/hmmer/src:/home/programms/RepeatMasker:/home/programms/masurca/MaSuRCA-3.2.8/bin:/home/programms/CMake/bin:/home/programms/bamtools/build/src/toolkit:/home/programms/augustus-3.3.2/src:/home/programms/interproscan:/home/programms/mcl-14-137/bin:/home/programms/minimap2:/home/programms/miniasm:/home/programms/racon/build/bin:/home/programms/canu/Linux-amd64/bin:/home/programms/hisat2:/home/programms/cufflinks:/home/programms/abyss/bin:/home/programms/transabyss:/home/programms/BLAT:/home/programms/bowtie2:/home/programms/STAR/bin/Linux_x86_64:/home/programms/spades/bin:/home/programms/pilon:/home/programms/gmes_petap:/home/programms/meth_progs_dist/src:/home/programms/StringTie:/home/programms/sqlite-tools-linux-x86-3290000:/home/programms/gmap-2017-11-15/util:/home/programms/PASApipeline-v2.3.3/bin:/home/programms/fasta-36.3.8g/bin:/home/programms/centrifuge-1.0.3-beta:/home/programms/wtdbg2:/home/programms/talesf:/home/programms/promoter-2.0:/home/programms/lin:/home/programms/NECAT/Linux-amd64/bin:/home/programms/LongQC/minimap2_mod:/home/programms/phobius:/home/programms/rgaugury:/home/programms/rgaugury/coils:/home/programms/interproscan:/home/programms/PfamScan:/home/programms/CViT:/home/programms/bwa:/home/programms/fastxtend/bin:/home/programms/mummer4/bin:/home/programms/pHMM/pHMM-Tree:/home/programms/canu/Linux-amd64/bin:/home/programms/salmon/bin:/home/programms/jellyfish/bin:/home/programms/augustus/bin:/home/programms/hal/bin:/usr/lib/jvm/java-1.8.0-openjdk/jre/bin
CONDA_BACKUP_CXXFLAGS => -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
MAIL => /var/spool/mail/root
CONDA_BACKUP_GFORTRAN => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
_ => /home/programms/php-7.4.6/sapi/cli/php
PICARD => /home/programms/picard/picard.jar
TBBROOT => /opt/intel/compilers_and_libraries_2018.3.222/linux/tbb
F90 => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
PWD => /home/programms/php-7.4.6
CONDA_BACKUP_DEBUG_FFLAGS => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
CONDA_BACKUP_OBJCOPY => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-objcopy
SGE_EXECD_PORT => 6445
PRODUCTNAME => RAID Web Console 2
GDB_CROSS => /opt/intel/debugger_2018/gdb/intel64/bin/gdb-ia
LANG => en_US.UTF-8
TEST_PHP_EXECUTABLE => /home/programms/php-7.4.6/sapi/cli/php
MODULEPATH => /usr/share/Modules/modulefiles:/etc/modulefiles
SGE_QMASTER_PORT => 6444
SGE_ROOT => /opt/sge
CONDA_BACKUP_OBJDUMP => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-objdump
LOADEDMODULES =>
TRINITYHOME => /home/programms/FunGAP/external/trinityrnaseq
BLASTDB => /home/BLAST_nr
CONDA_BACKUP__CONDA_PYTHON_SYSCONFIGDATA_NAME => _sysconfigdata_x86_64_conda_cos6_linux_gnu
AUGUSTUS_BIN_PATH => /home/programms/augustus/bin
DAALROOT => /opt/intel/compilers_and_libraries_2018.3.222/linux/daal
HISTCONTROL => ignoredups
MPM_LAUNCHER => /opt/intel/debugger_2018/mpm/mic/bin/start_mpm.sh
SSH_ASKPASS => /usr/libexec/openssh/gnome-ssh-askpass
_CE_M =>
FUNANNOTATE_DB => /home/programms/funannotate/database
CONDA_BACKUP_GCC_AR => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc-ar
INTEL_PYTHONHOME => /opt/intel/debugger_2018/python/intel64/
CONDA_BACKUP_ELFEDIT => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-elfedit
HOME => /root
SHLVL => 3
CONDA_BACKUP_NM => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-nm
fasta => /home/programms/fasta-36.3.8g/bin
CONDA_BACKUP_DEBUG_CFLAGS => -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -fno-plt -Og -g -Wall -Wextra -fvar-tracking-assignments -ffunction-sections -pipe
MSM_HOME => /usr/local/RAID Web Console 2
AUGUSTUS_CONFIG_PATH => /home/programms/augustus/config
ALIGNMENT_TOOL_PATH => /home/programms/gth/bin
CONDA_BACKUP_GCC => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc
LOGNAME => root
CONDA_PYTHON_EXE => /root/anaconda3/bin/python
QTLIB => /usr/lib64/qt-3.3/lib
LC_CTYPE => en_US.UTF-8
XDG_DATA_DIRS => /root/.local/share/flatpak/exports/share/:/var/lib/flatpak/exports/share/:/usr/local/share/:/usr/share/
SSH_CONNECTION => deleted
CONDA_BACKUP_GCC_RANLIB => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib
CLASSPATH => /opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib/mpi.jar:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/daal.jar:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib/mpi.jar:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/daal.jar
CONDA_BACKUP_DEBUG_FORTRANFLAGS => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
MODULESHOME => /usr/share/Modules
CONDA_BACKUP_CC => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-cc
LESSOPEN => ||/usr/bin/lesspipe.sh %s
PKG_CONFIG_PATH => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig
TSSPlant_DATA => /home/programms/lin/Data_TSSPlant
CONDA_BACKUP_FC => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
INFOPATH => /opt/intel/documentation_2018/en/debugger//gdb-ia/info/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/info/:/opt/intel/documentation_2018/en/debugger//gdb-ia/info/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/info/
CONDA_BACKUP_STRINGS => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-strings
TRINITY_HOME => /home/programms/FunGAP/external/trinityrnaseq
CONDA_BACKUP_LD_GOLD => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ld.gold
SGE_CLUSTER_NAME => p6444
XDG_RUNTIME_DIR => /run/user/0
CC => cc
CONDA_BACKUP_ADDR2LINE => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-addr2line
CONDA_BACKUP_CPP => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-cpp
CONDA_BACKUP_READELF => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-readelf
CONDA_BACKUP_CPPFLAGS => -DNDEBUG -D_FORTIFY_SOURCE=2 -O2
CONDA_BACKUP_CFLAGS => -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
I_MPI_ROOT => /opt/intel/compilers_and_libraries_2018.3.222/linux/mpi
BASH_FUNC_module() => () { eval `/usr/bin/modulecmd bash $*`
}
PHP Variables
Variable => Value
$_SERVER['MKLROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl
$_SERVER['CONDA_BACKUP_DEBUG_CXXFLAGS'] => -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -fno-plt -Og -g -Wall -Wextra -fvar-tracking-assignments -ffunction-sections -pipe
$_SERVER['MANPATH'] => /man:/opt/sge/man:/opt/intel/man/common:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/man:/opt/intel/documentation_2018/en/debugger//gdb-ia/man/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/man/:/man:/opt/sge/man:/opt/intel/man/common:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/man:/opt/intel/documentation_2018/en/debugger//gdb-ia/man/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/man/:/usr/local/share/man:/usr/share/man/overrides:/usr/share/man::
$_SERVER['CONDA_BACKUP_RANLIB'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ranlib
$_SERVER['COILSDIR'] => /home/programms/rgaugury/coils
$_SERVER['CONDA_BACKUP_FORTRANFLAGS'] => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_SERVER['XDG_SESSION_ID'] => 11456
$_SERVER['HOSTNAME'] => ksl
$_SERVER['TEST_PHP_SRCDIR'] => /home/programms/php-7.4.6
$_SERVER['INTEL_LICENSE_FILE'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/licenses:/opt/intel/licenses:/root/intel/licenses:/opt/intel/compilers_and_libraries_2018.3.222/linux/licenses:/opt/intel/licenses:/root/intel/licenses
$_SERVER['IPPROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/ipp
$_SERVER['CONDA_BACKUP_FFLAGS'] => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_SERVER['SHELL'] => /bin/bash
$_SERVER['RNASEQ'] => /home/programms/tools/RNA_seq_analysis
$_SERVER['TERM'] => xterm-256color
$_SERVER['HOST'] => x86_64-conda_cos6-linux-gnu
$_SERVER['CONDA_BACKUP_CXXFILT'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-c++filt
$_SERVER['MAKEFLAGS'] =>
$_SERVER['HISTSIZE'] => 1000
$_SERVER['CONDA_BACKUP_AR'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ar
$_SERVER['CONDA_BACKUP_GXX'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-g++
$_SERVER['SSH_CLIENT'] => deleted
$_SERVER['GDBSERVER_MIC'] => /opt/intel/debugger_2018/gdb/targets/intel64/x200/bin/gdbserver
$_SERVER['TEST_PHPDBG_EXECUTABLE'] => /home/programms/php-7.4.6/sapi/phpdbg/phpdbg
$_SERVER['LIBRARY_PATH'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/../tbb/lib/intel64_lin/gcc4.4
$_SERVER['PERL5LIB'] => :/home/programms/PfamScan:/home/programms/PfamScan
$_SERVER['CONDA_BACKUP_AS'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-as
$_SERVER['CONDA_SHLVL'] => 0
$_SERVER['SGE_CELL'] => default
$_SERVER['PFAMDB'] => /home/programms/PfamScan
$_SERVER['SGE_ARCH'] => lx-amd64
$_SERVER['QTDIR'] => /usr/lib64/qt-3.3
$_SERVER['CONDA_BACKUP_LD'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ld
$_SERVER['SCIPIO'] => /home/programms/scipio-1.4
$_SERVER['CONDA_BACKUP_STRIP'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-strip
$_SERVER['QTINC'] => /usr/lib64/qt-3.3/include
$_SERVER['SSH_TTY'] => deleted
$_SERVER['QT_GRAPHICSSYSTEM_CHECKED'] => 1
$_SERVER['CONDA_BACKUP_DEBUG_CPPFLAGS'] => -D_DEBUG -D_FORTIFY_SOURCE=2 -Og
$_SERVER['BAMTOOLS_PATH'] => /usr/local/bin
$_SERVER['USER'] => root
$_SERVER['LS_COLORS'] => rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arc=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lha=38;5;9:*.lz4=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.tzo=38;5;9:*.t7z=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lrz=38;5;9:*.lz=38;5;9:*.lzo=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.bz=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.war=38;5;9:*.ear=38;5;9:*.sar=38;5;9:*.rar=38;5;9:*.alz=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.cab=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.webm=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45:
$_SERVER['GENEMARK_PATH'] => /home/programms/FunGAP/external/gm_et_linux_64/gmes_petap
$_SERVER['LD_LIBRARY_PATH'] => /lib:/usr/local/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/debugger_2018/iga/lib:/opt/intel/debugger_2018/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/lib:/usr/local/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/debugger_2018/iga/lib:/opt/intel/debugger_2018/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/../tbb/lib/intel64_lin/gcc4.4
$_SERVER['CONDA_BACKUP_GCC_NM'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc-nm
$_SERVER['CONDA_BACKUP_SIZE'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-size
$_SERVER['CONDA_BACKUP_F77'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
$_SERVER['CONDA_BACKUP_HOST'] => x86_64-conda_cos6-linux-gnu
$_SERVER['PSTLROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/pstl
$_SERVER['CONDA_BACKUP_F95'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-f95
$_SERVER['CONDA_EXE'] => /root/anaconda3/bin/conda
$_SERVER['CONDA_BACKUP_GPROF'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gprof
$_SERVER['SSH_AUTH_SOCK'] => deleted
$_SERVER['CPATH'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/pstl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/pstl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/include
$_SERVER['AUGUSTUS_SCRIPTS_PATH'] => /home/programms/augustus/scripts
$_SERVER['MAKELEVEL'] => 1
$_SERVER['MSM_PRODUCT'] => RWC2
$_SERVER['CONDA_BACKUP_LDFLAGS'] => -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections
$_SERVER['MFLAGS'] =>
$_SERVER['TOOLDIR'] => /home/programms/tools
$_SERVER['_CE_CONDA'] =>
$_SERVER['CONDA_BACKUP_CXX'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-c++
$_SERVER['NLSPATH'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2018/gdb/intel64/share/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2018/gdb/intel64/share/locale/%l_%t/%N
$_SERVER['PATH'] => /bin:/opt/sge/bin:/opt/sge/bin/lx-amd64:/opt/intel/compilers_and_libraries_2018.3.222/linux/bin/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin:/root/anaconda3/condabin:/bin:/opt/sge/bin:/opt/sge/bin/lx-amd64:/opt/intel/compilers_and_libraries_2018.3.222/linux/bin/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin:/usr/lib64/qt-3.3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/home/programms/velvet:/home/programms/oases:/home/programms/Sibelia/build:/home/programms/tools/samtools:/home/programms/tools/bcftools:/home/programms/tools/tabix:/home/programms/SOAPdenovo2:/home/programms/hmmer/src:/home/programms/RepeatMasker:/home/programms/masurca/MaSuRCA-3.2.8/bin:/home/programms/CMake/bin:/home/programms/bamtools/build/src/toolkit:/home/programms/augustus-3.3.2/src:/home/programms/interproscan:/home/programms/mcl-14-137/bin:/home/programms/minimap2:/home/programms/miniasm:/home/programms/racon/build/bin:/home/programms/canu/Linux-amd64/bin:/home/programms/hisat2:/home/programms/cufflinks:/home/programms/abyss/bin:/home/programms/transabyss:/home/programms/BLAT:/home/programms/bowtie2:/home/programms/STAR/bin/Linux_x86_64:/home/programms/spades/bin:/home/programms/pilon:/home/programms/gmes_petap:/home/programms/meth_progs_dist/src:/home/programms/StringTie:/home/programms/sqlite-tools-linux-x86-3290000:/home/programms/gmap-2017-11-15/util:/home/programms/PASApipeline-v2.3.3/bin:/home/programms/fasta-36.3.8g/bin:/home/programms/centrifuge-1.0.3-beta:/home/programms/wtdbg2:/home/programms/talesf:/home/programms/promoter-2.0:/home/programms/lin:/home/programms/NECAT/Linux-amd64/bin:/home/programms/LongQC/minimap2_mod:/home/programms/phobius:/home/programms/rgaugury:/home/programms/rgaugury/coils:/home/programms/interproscan:/home/programms/PfamScan:/home/programms/CViT:/home/programms/bwa:/home/programms/fastxtend/bin:/home/programms/pHMM/pHMM-Tree:/home/programms/canu/Linux-amd64/bin:/home/programms/salmon/bin:/home/programms/jellyfish/bin:/home/programms/augustus/bin:/home/programms/hal/bin:/usr/lib/jvm/java-1.8.0-openjdk/jre/bin:/root/bin:/home/programms/velvet:/home/programms/oases:/home/programms/Sibelia/build:/home/programms/tools/samtools:/home/programms/tools/bcftools:/home/programms/tools/tabix:/home/programms/SOAPdenovo2:/home/programms/hmmer/src:/home/programms/RepeatMasker:/home/programms/masurca/MaSuRCA-3.2.8/bin:/home/programms/CMake/bin:/home/programms/bamtools/build/src/toolkit:/home/programms/augustus-3.3.2/src:/home/programms/interproscan:/home/programms/mcl-14-137/bin:/home/programms/minimap2:/home/programms/miniasm:/home/programms/racon/build/bin:/home/programms/canu/Linux-amd64/bin:/home/programms/hisat2:/home/programms/cufflinks:/home/programms/abyss/bin:/home/programms/transabyss:/home/programms/BLAT:/home/programms/bowtie2:/home/programms/STAR/bin/Linux_x86_64:/home/programms/spades/bin:/home/programms/pilon:/home/programms/gmes_petap:/home/programms/meth_progs_dist/src:/home/programms/StringTie:/home/programms/sqlite-tools-linux-x86-3290000:/home/programms/gmap-2017-11-15/util:/home/programms/PASApipeline-v2.3.3/bin:/home/programms/fasta-36.3.8g/bin:/home/programms/centrifuge-1.0.3-beta:/home/programms/wtdbg2:/home/programms/talesf:/home/programms/promoter-2.0:/home/programms/lin:/home/programms/NECAT/Linux-amd64/bin:/home/programms/LongQC/minimap2_mod:/home/programms/phobius:/home/programms/rgaugury:/home/programms/rgaugury/coils:/home/programms/interproscan:/home/programms/PfamScan:/home/programms/CViT:/home/programms/bwa:/home/programms/fastxtend/bin:/home/programms/mummer4/bin:/home/programms/pHMM/pHMM-Tree:/home/programms/canu/Linux-amd64/bin:/home/programms/salmon/bin:/home/programms/jellyfish/bin:/home/programms/augustus/bin:/home/programms/hal/bin:/usr/lib/jvm/java-1.8.0-openjdk/jre/bin
$_SERVER['CONDA_BACKUP_CXXFLAGS'] => -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_SERVER['MAIL'] => /var/spool/mail/root
$_SERVER['CONDA_BACKUP_GFORTRAN'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
$_SERVER['_'] => /home/programms/php-7.4.6/sapi/cli/php
$_SERVER['PICARD'] => /home/programms/picard/picard.jar
$_SERVER['TBBROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/tbb
$_SERVER['F90'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
$_SERVER['PWD'] => /home/programms/php-7.4.6
$_SERVER['CONDA_BACKUP_DEBUG_FFLAGS'] => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_SERVER['CONDA_BACKUP_OBJCOPY'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-objcopy
$_SERVER['SGE_EXECD_PORT'] => 6445
$_SERVER['PRODUCTNAME'] => RAID Web Console 2
$_SERVER['GDB_CROSS'] => /opt/intel/debugger_2018/gdb/intel64/bin/gdb-ia
$_SERVER['LANG'] => en_US.UTF-8
$_SERVER['TEST_PHP_EXECUTABLE'] => /home/programms/php-7.4.6/sapi/cli/php
$_SERVER['MODULEPATH'] => /usr/share/Modules/modulefiles:/etc/modulefiles
$_SERVER['SGE_QMASTER_PORT'] => 6444
$_SERVER['SGE_ROOT'] => /opt/sge
$_SERVER['CONDA_BACKUP_OBJDUMP'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-objdump
$_SERVER['LOADEDMODULES'] =>
$_SERVER['TRINITYHOME'] => /home/programms/FunGAP/external/trinityrnaseq
$_SERVER['BLASTDB'] => /home/BLAST_nr
$_SERVER['CONDA_BACKUP__CONDA_PYTHON_SYSCONFIGDATA_NAME'] => _sysconfigdata_x86_64_conda_cos6_linux_gnu
$_SERVER['AUGUSTUS_BIN_PATH'] => /home/programms/augustus/bin
$_SERVER['DAALROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/daal
$_SERVER['HISTCONTROL'] => ignoredups
$_SERVER['MPM_LAUNCHER'] => /opt/intel/debugger_2018/mpm/mic/bin/start_mpm.sh
$_SERVER['SSH_ASKPASS'] => /usr/libexec/openssh/gnome-ssh-askpass
$_SERVER['_CE_M'] =>
$_SERVER['FUNANNOTATE_DB'] => /home/programms/funannotate/database
$_SERVER['CONDA_BACKUP_GCC_AR'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc-ar
$_SERVER['INTEL_PYTHONHOME'] => /opt/intel/debugger_2018/python/intel64/
$_SERVER['CONDA_BACKUP_ELFEDIT'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-elfedit
$_SERVER['HOME'] => /root
$_SERVER['SHLVL'] => 3
$_SERVER['CONDA_BACKUP_NM'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-nm
$_SERVER['fasta'] => /home/programms/fasta-36.3.8g/bin
$_SERVER['CONDA_BACKUP_DEBUG_CFLAGS'] => -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -fno-plt -Og -g -Wall -Wextra -fvar-tracking-assignments -ffunction-sections -pipe
$_SERVER['MSM_HOME'] => /usr/local/RAID Web Console 2
$_SERVER['AUGUSTUS_CONFIG_PATH'] => /home/programms/augustus/config
$_SERVER['ALIGNMENT_TOOL_PATH'] => /home/programms/gth/bin
$_SERVER['CONDA_BACKUP_GCC'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc
$_SERVER['LOGNAME'] => root
$_SERVER['CONDA_PYTHON_EXE'] => /root/anaconda3/bin/python
$_SERVER['QTLIB'] => /usr/lib64/qt-3.3/lib
$_SERVER['LC_CTYPE'] => en_US.UTF-8
$_SERVER['XDG_DATA_DIRS'] => /root/.local/share/flatpak/exports/share/:/var/lib/flatpak/exports/share/:/usr/local/share/:/usr/share/
$_SERVER['SSH_CONNECTION'] => deleted
$_SERVER['CONDA_BACKUP_GCC_RANLIB'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib
$_SERVER['CLASSPATH'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib/mpi.jar:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/daal.jar:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib/mpi.jar:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/daal.jar
$_SERVER['CONDA_BACKUP_DEBUG_FORTRANFLAGS'] => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_SERVER['MODULESHOME'] => /usr/share/Modules
$_SERVER['CONDA_BACKUP_CC'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-cc
$_SERVER['LESSOPEN'] => ||/usr/bin/lesspipe.sh %s
$_SERVER['PKG_CONFIG_PATH'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig
$_SERVER['TSSPlant_DATA'] => /home/programms/lin/Data_TSSPlant
$_SERVER['CONDA_BACKUP_FC'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
$_SERVER['INFOPATH'] => /opt/intel/documentation_2018/en/debugger//gdb-ia/info/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/info/:/opt/intel/documentation_2018/en/debugger//gdb-ia/info/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/info/
$_SERVER['CONDA_BACKUP_STRINGS'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-strings
$_SERVER['TRINITY_HOME'] => /home/programms/FunGAP/external/trinityrnaseq
$_SERVER['CONDA_BACKUP_LD_GOLD'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ld.gold
$_SERVER['SGE_CLUSTER_NAME'] => p6444
$_SERVER['XDG_RUNTIME_DIR'] => /run/user/0
$_SERVER['CC'] => cc
$_SERVER['CONDA_BACKUP_ADDR2LINE'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-addr2line
$_SERVER['CONDA_BACKUP_CPP'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-cpp
$_SERVER['CONDA_BACKUP_READELF'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-readelf
$_SERVER['CONDA_BACKUP_CPPFLAGS'] => -DNDEBUG -D_FORTIFY_SOURCE=2 -O2
$_SERVER['CONDA_BACKUP_CFLAGS'] => -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_SERVER['I_MPI_ROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mpi
$_SERVER['BASH_FUNC_module()'] => () { eval `/usr/bin/modulecmd bash $*`
}
$_SERVER['PHP_SELF'] =>
$_SERVER['SCRIPT_NAME'] =>
$_SERVER['SCRIPT_FILENAME'] =>
$_SERVER['PATH_TRANSLATED'] =>
$_SERVER['DOCUMENT_ROOT'] =>
$_SERVER['REQUEST_TIME_FLOAT'] => 1590472791.3298
$_SERVER['REQUEST_TIME'] => 1590472791
$_SERVER['argv'] => Array
(
)
$_SERVER['argc'] => 0
$_ENV['MKLROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl
$_ENV['CONDA_BACKUP_DEBUG_CXXFLAGS'] => -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -fno-plt -Og -g -Wall -Wextra -fvar-tracking-assignments -ffunction-sections -pipe
$_ENV['MANPATH'] => /man:/opt/sge/man:/opt/intel/man/common:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/man:/opt/intel/documentation_2018/en/debugger//gdb-ia/man/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/man/:/man:/opt/sge/man:/opt/intel/man/common:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/man:/opt/intel/documentation_2018/en/debugger//gdb-ia/man/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/man/:/usr/local/share/man:/usr/share/man/overrides:/usr/share/man::
$_ENV['CONDA_BACKUP_RANLIB'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ranlib
$_ENV['COILSDIR'] => /home/programms/rgaugury/coils
$_ENV['CONDA_BACKUP_FORTRANFLAGS'] => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_ENV['XDG_SESSION_ID'] => 11456
$_ENV['HOSTNAME'] => ksl
$_ENV['TEST_PHP_SRCDIR'] => /home/programms/php-7.4.6
$_ENV['INTEL_LICENSE_FILE'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/licenses:/opt/intel/licenses:/root/intel/licenses:/opt/intel/compilers_and_libraries_2018.3.222/linux/licenses:/opt/intel/licenses:/root/intel/licenses
$_ENV['IPPROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/ipp
$_ENV['CONDA_BACKUP_FFLAGS'] => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_ENV['SHELL'] => /bin/bash
$_ENV['RNASEQ'] => /home/programms/tools/RNA_seq_analysis
$_ENV['TERM'] => xterm-256color
$_ENV['HOST'] => x86_64-conda_cos6-linux-gnu
$_ENV['CONDA_BACKUP_CXXFILT'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-c++filt
$_ENV['MAKEFLAGS'] =>
$_ENV['HISTSIZE'] => 1000
$_ENV['CONDA_BACKUP_AR'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ar
$_ENV['CONDA_BACKUP_GXX'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-g++
$_ENV['SSH_CLIENT'] => deleted
$_ENV['GDBSERVER_MIC'] => /opt/intel/debugger_2018/gdb/targets/intel64/x200/bin/gdbserver
$_ENV['TEST_PHPDBG_EXECUTABLE'] => /home/programms/php-7.4.6/sapi/phpdbg/phpdbg
$_ENV['LIBRARY_PATH'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/../tbb/lib/intel64_lin/gcc4.4
$_ENV['PERL5LIB'] => :/home/programms/PfamScan:/home/programms/PfamScan
$_ENV['CONDA_BACKUP_AS'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-as
$_ENV['CONDA_SHLVL'] => 0
$_ENV['SGE_CELL'] => default
$_ENV['PFAMDB'] => /home/programms/PfamScan
$_ENV['SGE_ARCH'] => lx-amd64
$_ENV['QTDIR'] => /usr/lib64/qt-3.3
$_ENV['CONDA_BACKUP_LD'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ld
$_ENV['SCIPIO'] => /home/programms/scipio-1.4
$_ENV['CONDA_BACKUP_STRIP'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-strip
$_ENV['QTINC'] => /usr/lib64/qt-3.3/include
$_ENV['SSH_TTY'] => deleted
$_ENV['QT_GRAPHICSSYSTEM_CHECKED'] => 1
$_ENV['CONDA_BACKUP_DEBUG_CPPFLAGS'] => -D_DEBUG -D_FORTIFY_SOURCE=2 -Og
$_ENV['BAMTOOLS_PATH'] => /usr/local/bin
$_ENV['USER'] => root
$_ENV['LS_COLORS'] => rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arc=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lha=38;5;9:*.lz4=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.tzo=38;5;9:*.t7z=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lrz=38;5;9:*.lz=38;5;9:*.lzo=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.bz=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.war=38;5;9:*.ear=38;5;9:*.sar=38;5;9:*.rar=38;5;9:*.alz=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.cab=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.webm=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45:
$_ENV['GENEMARK_PATH'] => /home/programms/FunGAP/external/gm_et_linux_64/gmes_petap
$_ENV['LD_LIBRARY_PATH'] => /lib:/usr/local/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/debugger_2018/iga/lib:/opt/intel/debugger_2018/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/lib:/usr/local/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/lib/intel64/gcc4.7:/opt/intel/debugger_2018/iga/lib:/opt/intel/debugger_2018/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/../tbb/lib/intel64_lin/gcc4.4
$_ENV['CONDA_BACKUP_GCC_NM'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc-nm
$_ENV['CONDA_BACKUP_SIZE'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-size
$_ENV['CONDA_BACKUP_F77'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
$_ENV['CONDA_BACKUP_HOST'] => x86_64-conda_cos6-linux-gnu
$_ENV['PSTLROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/pstl
$_ENV['CONDA_BACKUP_F95'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-f95
$_ENV['CONDA_EXE'] => /root/anaconda3/bin/conda
$_ENV['CONDA_BACKUP_GPROF'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gprof
$_ENV['SSH_AUTH_SOCK'] => deleted
$_ENV['CPATH'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/pstl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/ipp/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/pstl/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/include
$_ENV['AUGUSTUS_SCRIPTS_PATH'] => /home/programms/augustus/scripts
$_ENV['MAKELEVEL'] => 1
$_ENV['MSM_PRODUCT'] => RWC2
$_ENV['CONDA_BACKUP_LDFLAGS'] => -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections
$_ENV['MFLAGS'] =>
$_ENV['TOOLDIR'] => /home/programms/tools
$_ENV['_CE_CONDA'] =>
$_ENV['CONDA_BACKUP_CXX'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-c++
$_ENV['NLSPATH'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2018/gdb/intel64/share/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2018/gdb/intel64/share/locale/%l_%t/%N
$_ENV['PATH'] => /bin:/opt/sge/bin:/opt/sge/bin/lx-amd64:/opt/intel/compilers_and_libraries_2018.3.222/linux/bin/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin:/root/anaconda3/condabin:/bin:/opt/sge/bin:/opt/sge/bin/lx-amd64:/opt/intel/compilers_and_libraries_2018.3.222/linux/bin/intel64:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin:/usr/lib64/qt-3.3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/home/programms/velvet:/home/programms/oases:/home/programms/Sibelia/build:/home/programms/tools/samtools:/home/programms/tools/bcftools:/home/programms/tools/tabix:/home/programms/SOAPdenovo2:/home/programms/hmmer/src:/home/programms/RepeatMasker:/home/programms/masurca/MaSuRCA-3.2.8/bin:/home/programms/CMake/bin:/home/programms/bamtools/build/src/toolkit:/home/programms/augustus-3.3.2/src:/home/programms/interproscan:/home/programms/mcl-14-137/bin:/home/programms/minimap2:/home/programms/miniasm:/home/programms/racon/build/bin:/home/programms/canu/Linux-amd64/bin:/home/programms/hisat2:/home/programms/cufflinks:/home/programms/abyss/bin:/home/programms/transabyss:/home/programms/BLAT:/home/programms/bowtie2:/home/programms/STAR/bin/Linux_x86_64:/home/programms/spades/bin:/home/programms/pilon:/home/programms/gmes_petap:/home/programms/meth_progs_dist/src:/home/programms/StringTie:/home/programms/sqlite-tools-linux-x86-3290000:/home/programms/gmap-2017-11-15/util:/home/programms/PASApipeline-v2.3.3/bin:/home/programms/fasta-36.3.8g/bin:/home/programms/centrifuge-1.0.3-beta:/home/programms/wtdbg2:/home/programms/talesf:/home/programms/promoter-2.0:/home/programms/lin:/home/programms/NECAT/Linux-amd64/bin:/home/programms/LongQC/minimap2_mod:/home/programms/phobius:/home/programms/rgaugury:/home/programms/rgaugury/coils:/home/programms/interproscan:/home/programms/PfamScan:/home/programms/CViT:/home/programms/bwa:/home/programms/fastxtend/bin:/home/programms/pHMM/pHMM-Tree:/home/programms/canu/Linux-amd64/bin:/home/programms/salmon/bin:/home/programms/jellyfish/bin:/home/programms/augustus/bin:/home/programms/hal/bin:/usr/lib/jvm/java-1.8.0-openjdk/jre/bin:/root/bin:/home/programms/velvet:/home/programms/oases:/home/programms/Sibelia/build:/home/programms/tools/samtools:/home/programms/tools/bcftools:/home/programms/tools/tabix:/home/programms/SOAPdenovo2:/home/programms/hmmer/src:/home/programms/RepeatMasker:/home/programms/masurca/MaSuRCA-3.2.8/bin:/home/programms/CMake/bin:/home/programms/bamtools/build/src/toolkit:/home/programms/augustus-3.3.2/src:/home/programms/interproscan:/home/programms/mcl-14-137/bin:/home/programms/minimap2:/home/programms/miniasm:/home/programms/racon/build/bin:/home/programms/canu/Linux-amd64/bin:/home/programms/hisat2:/home/programms/cufflinks:/home/programms/abyss/bin:/home/programms/transabyss:/home/programms/BLAT:/home/programms/bowtie2:/home/programms/STAR/bin/Linux_x86_64:/home/programms/spades/bin:/home/programms/pilon:/home/programms/gmes_petap:/home/programms/meth_progs_dist/src:/home/programms/StringTie:/home/programms/sqlite-tools-linux-x86-3290000:/home/programms/gmap-2017-11-15/util:/home/programms/PASApipeline-v2.3.3/bin:/home/programms/fasta-36.3.8g/bin:/home/programms/centrifuge-1.0.3-beta:/home/programms/wtdbg2:/home/programms/talesf:/home/programms/promoter-2.0:/home/programms/lin:/home/programms/NECAT/Linux-amd64/bin:/home/programms/LongQC/minimap2_mod:/home/programms/phobius:/home/programms/rgaugury:/home/programms/rgaugury/coils:/home/programms/interproscan:/home/programms/PfamScan:/home/programms/CViT:/home/programms/bwa:/home/programms/fastxtend/bin:/home/programms/mummer4/bin:/home/programms/pHMM/pHMM-Tree:/home/programms/canu/Linux-amd64/bin:/home/programms/salmon/bin:/home/programms/jellyfish/bin:/home/programms/augustus/bin:/home/programms/hal/bin:/usr/lib/jvm/java-1.8.0-openjdk/jre/bin
$_ENV['CONDA_BACKUP_CXXFLAGS'] => -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_ENV['MAIL'] => /var/spool/mail/root
$_ENV['CONDA_BACKUP_GFORTRAN'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
$_ENV['_'] => /home/programms/php-7.4.6/sapi/cli/php
$_ENV['PICARD'] => /home/programms/picard/picard.jar
$_ENV['TBBROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/tbb
$_ENV['F90'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
$_ENV['PWD'] => /home/programms/php-7.4.6
$_ENV['CONDA_BACKUP_DEBUG_FFLAGS'] => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_ENV['CONDA_BACKUP_OBJCOPY'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-objcopy
$_ENV['SGE_EXECD_PORT'] => 6445
$_ENV['PRODUCTNAME'] => RAID Web Console 2
$_ENV['GDB_CROSS'] => /opt/intel/debugger_2018/gdb/intel64/bin/gdb-ia
$_ENV['LANG'] => en_US.UTF-8
$_ENV['TEST_PHP_EXECUTABLE'] => /home/programms/php-7.4.6/sapi/cli/php
$_ENV['MODULEPATH'] => /usr/share/Modules/modulefiles:/etc/modulefiles
$_ENV['SGE_QMASTER_PORT'] => 6444
$_ENV['SGE_ROOT'] => /opt/sge
$_ENV['CONDA_BACKUP_OBJDUMP'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-objdump
$_ENV['LOADEDMODULES'] =>
$_ENV['TRINITYHOME'] => /home/programms/FunGAP/external/trinityrnaseq
$_ENV['BLASTDB'] => /home/BLAST_nr
$_ENV['CONDA_BACKUP__CONDA_PYTHON_SYSCONFIGDATA_NAME'] => _sysconfigdata_x86_64_conda_cos6_linux_gnu
$_ENV['AUGUSTUS_BIN_PATH'] => /home/programms/augustus/bin
$_ENV['DAALROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/daal
$_ENV['HISTCONTROL'] => ignoredups
$_ENV['MPM_LAUNCHER'] => /opt/intel/debugger_2018/mpm/mic/bin/start_mpm.sh
$_ENV['SSH_ASKPASS'] => /usr/libexec/openssh/gnome-ssh-askpass
$_ENV['_CE_M'] =>
$_ENV['FUNANNOTATE_DB'] => /home/programms/funannotate/database
$_ENV['CONDA_BACKUP_GCC_AR'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc-ar
$_ENV['INTEL_PYTHONHOME'] => /opt/intel/debugger_2018/python/intel64/
$_ENV['CONDA_BACKUP_ELFEDIT'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-elfedit
$_ENV['HOME'] => /root
$_ENV['SHLVL'] => 3
$_ENV['CONDA_BACKUP_NM'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-nm
$_ENV['fasta'] => /home/programms/fasta-36.3.8g/bin
$_ENV['CONDA_BACKUP_DEBUG_CFLAGS'] => -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-all -fno-plt -Og -g -Wall -Wextra -fvar-tracking-assignments -ffunction-sections -pipe
$_ENV['MSM_HOME'] => /usr/local/RAID Web Console 2
$_ENV['AUGUSTUS_CONFIG_PATH'] => /home/programms/augustus/config
$_ENV['ALIGNMENT_TOOL_PATH'] => /home/programms/gth/bin
$_ENV['CONDA_BACKUP_GCC'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc
$_ENV['LOGNAME'] => root
$_ENV['CONDA_PYTHON_EXE'] => /root/anaconda3/bin/python
$_ENV['QTLIB'] => /usr/lib64/qt-3.3/lib
$_ENV['LC_CTYPE'] => en_US.UTF-8
$_ENV['XDG_DATA_DIRS'] => /root/.local/share/flatpak/exports/share/:/var/lib/flatpak/exports/share/:/usr/local/share/:/usr/share/
$_ENV['SSH_CONNECTION'] => deleted
$_ENV['CONDA_BACKUP_GCC_RANLIB'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib
$_ENV['CLASSPATH'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib/mpi.jar:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/daal.jar:/opt/intel/compilers_and_libraries_2018.3.222/linux/mpi/intel64/lib/mpi.jar:/opt/intel/compilers_and_libraries_2018.3.222/linux/daal/lib/daal.jar
$_ENV['CONDA_BACKUP_DEBUG_FORTRANFLAGS'] => -fopenmp -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_ENV['MODULESHOME'] => /usr/share/Modules
$_ENV['CONDA_BACKUP_CC'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-cc
$_ENV['LESSOPEN'] => ||/usr/bin/lesspipe.sh %s
$_ENV['PKG_CONFIG_PATH'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig:/opt/intel/compilers_and_libraries_2018.3.222/linux/mkl/bin/pkgconfig
$_ENV['TSSPlant_DATA'] => /home/programms/lin/Data_TSSPlant
$_ENV['CONDA_BACKUP_FC'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-gfortran
$_ENV['INFOPATH'] => /opt/intel/documentation_2018/en/debugger//gdb-ia/info/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/info/:/opt/intel/documentation_2018/en/debugger//gdb-ia/info/:/opt/intel/documentation_2018/en/debugger//gdb-igfx/info/
$_ENV['CONDA_BACKUP_STRINGS'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-strings
$_ENV['TRINITY_HOME'] => /home/programms/FunGAP/external/trinityrnaseq
$_ENV['CONDA_BACKUP_LD_GOLD'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-ld.gold
$_ENV['SGE_CLUSTER_NAME'] => p6444
$_ENV['XDG_RUNTIME_DIR'] => /run/user/0
$_ENV['CC'] => cc
$_ENV['CONDA_BACKUP_ADDR2LINE'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-addr2line
$_ENV['CONDA_BACKUP_CPP'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-cpp
$_ENV['CONDA_BACKUP_READELF'] => /root/anaconda3/bin/x86_64-conda_cos6-linux-gnu-readelf
$_ENV['CONDA_BACKUP_CPPFLAGS'] => -DNDEBUG -D_FORTIFY_SOURCE=2 -O2
$_ENV['CONDA_BACKUP_CFLAGS'] => -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe
$_ENV['I_MPI_ROOT'] => /opt/intel/compilers_and_libraries_2018.3.222/linux/mpi
$_ENV['BASH_FUNC_module()'] => () { eval `/usr/bin/modulecmd bash $*`
}
PHP License
This program is free software; you can redistribute it and/or modify
it under the terms of the PHP License as published by the PHP Group
and included in the distribution in the file: LICENSE
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
If you did not receive a copy of the PHP license, or have any
questions about PHP licensing, please contact license@php.net.
Build environment
OS: Li*** (truncated on purpose) ***ux - Li*** (truncated on purpose) ***ux ksl 3.10.0-862.14.4.el7.x86_64 #1 SMP Wed Sep 26 15:12:11 UTC 2018 x86_64 Autoco*** (truncated on purpose) ***f: autoco*** (truncated on purpose) ***f (GNU Autoco*** (truncated on purpose) ***f) 2.69 Copyright (C) 2012 Free Software Fou*** (truncated on purpose) ***datio*** (truncated on purpose) ***, I*** (truncated on purpose) ***c. Lice*** (truncated on purpose) ***se GPLv3+/Autoco*** (truncated on purpose) ***f: GNU GPL versio*** (truncated on purpose) *** 3 or later <http://g*** (truncated on purpose) ***u.org/lice*** (truncated on purpose) ***ses/gpl.html>, <http://g*** (truncated on purpose) ***u.org/lice*** (truncated on purpose) ***ses/exceptio*** (truncated on purpose) ***s.html> This is free software: you are free to cha*** (truncated on purpose) ***ge a*** (truncated on purpose) ***d redistribute it. There is NO WARRANTY, to the exte*** (truncated on purpose) ***t permitted by law. Writte*** (truncated on purpose) *** by David J. MacKe*** (truncated on purpose) ***zie a*** (truncated on purpose) ***d Akim Demaille. Bu*** (truncated on purpose) ***dled Libtool: ltmai*** (truncated on purpose) ***.sh (GNU libtool) 1.5.26 (1.1220.2.492 2008/01/30 06:40:56) Copyright (C) 2008 Free Software Fou*** (truncated on purpose) ***datio*** (truncated on purpose) ***, I*** (truncated on purpose) ***c. This is free software; see the source for copyi*** (truncated on purpose) ***g co*** (truncated on purpose) ***ditio*** (truncated on purpose) ***s. There is NO warra*** (truncated on purpose) ***ty; *** (truncated on purpose) ***ot eve*** (truncated on purpose) *** for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. System Libtool: libtool (GNU libtool) 2.4.2 Writte*** (truncated on purpose) *** by Gordo*** (truncated on purpose) *** Matzigkeit <gord@g*** (truncated on purpose) ***u.ai.mit.edu>, 1996 Copyright (C) 2011 Free Software Fou*** (truncated on purpose) ***datio*** (truncated on purpose) ***, I*** (truncated on purpose) ***c. This is free software; see the source for copyi*** (truncated on purpose) ***g co*** (truncated on purpose) ***ditio*** (truncated on purpose) ***s. There is NO warra*** (truncated on purpose) ***ty; *** (truncated on purpose) ***ot eve*** (truncated on purpose) *** for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Compiler: Usi*** (truncated on purpose) ***g built-i*** (truncated on purpose) *** specs. COLLECT_GCC=cc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-li*** (truncated on purpose) ***ux/4.8.5/lto-wrapper Target: x86_64-redhat-li*** (truncated on purpose) ***ux Co*** (truncated on purpose) ***figured with: ../co*** (truncated on purpose) ***figure --prefix=/usr --ma*** (truncated on purpose) ***dir=/usr/share/ma*** (truncated on purpose) *** --i*** (truncated on purpose) ***fodir=/usr/share/i*** (truncated on purpose) ***fo --with-bugurl=http://bugzilla.redhat.com/bugzilla --e*** (truncated on purpose) ***able-bootstrap --e*** (truncated on purpose) ***able-shared --e*** (truncated on purpose) ***able-threads=posix --e*** (truncated on purpose) ***able-checki*** (truncated on purpose) ***g=release --with-system-zlib --e*** (truncated on purpose) ***able-__cxa_atexit --disable-libu*** (truncated on purpose) ***wi*** (truncated on purpose) ***d-exceptio*** (truncated on purpose) ***s --e*** (truncated on purpose) ***able-g*** (truncated on purpose) ***u-u*** (truncated on purpose) ***ique-object --e*** (truncated on purpose) ***able-li*** (truncated on purpose) ***ker-build-id --with-li*** (truncated on purpose) ***ker-hash-style=g*** (truncated on purpose) ***u --e*** (truncated on purpose) ***able-la*** (truncated on purpose) ***guages=c,c++,objc,obj-c++,java,fortra*** (truncated on purpose) ***,ada,go,lto --e*** (truncated on purpose) ***able-plugi*** (truncated on purpose) *** --e*** (truncated on purpose) ***able-i*** (truncated on purpose) ***itfi*** (truncated on purpose) ***i-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-li*** (truncated on purpose) ***ux/isl-i*** (truncated on purpose) ***stall --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-li*** (truncated on purpose) ***ux/cloog-i*** (truncated on purpose) ***stall --e*** (truncated on purpose) ***able-g*** (truncated on purpose) ***u-i*** (truncated on purpose) ***direct-fu*** (truncated on purpose) ***ctio*** (truncated on purpose) *** --with-tu*** (truncated on purpose) ***e=ge*** (truncated on purpose) ***eric --with-arch_32=x86-64 --build=x86_64-redhat-li*** (truncated on purpose) ***ux Thread model: posix gcc versio*** (truncated on purpose) *** 4.8.5 20150623 (Red Hat 4.8.5-39) (GCC) Biso*** (truncated on purpose) ***: biso*** (truncated on purpose) *** (GNU Biso*** (truncated on purpose) ***) 3.0.4 Writte*** (truncated on purpose) *** by Robert Corbett a*** (truncated on purpose) ***d Richard Stallma*** (truncated on purpose) ***. Copyright (C) 2015 Free Software Fou*** (truncated on purpose) ***datio*** (truncated on purpose) ***, I*** (truncated on purpose) ***c. This is free software; see the source for copyi*** (truncated on purpose) ***g co*** (truncated on purpose) ***ditio*** (truncated on purpose) ***s. There is NO warra*** (truncated on purpose) ***ty; *** (truncated on purpose) ***ot eve*** (truncated on purpose) *** for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Libraries: li*** (truncated on purpose) ***ux-vdso.so.1 => (0x00007fff73d80000) libcrypt.so.1 => /lib64/libcrypt.so.1 (0x00002b2a7d51c000) libresolv.so.2 => /lib64/libresolv.so.2 (0x00002b2a7d753000) librt.so.1 => /lib64/librt.so.1 (0x00002b2a7d96d000) libm.so.6 => /lib64/libm.so.6 (0x00002b2a7db75000) libdl.so.2 => /lib64/libdl.so.2 (0x00002b2a7de77000) libxml2.so.2 => /lib64/libxml2.so.2 (0x00002b2a7e07b000) libsqlite3.so.0 => /lib64/libsqlite3.so.0 (0x00002b2a7e3e5000) libc.so.6 => /lib64/libc.so.6 (0x00002b2a7e69a000) libfreebl3.so => /lib64/libfreebl3.so (0x00002b2a7ea68000) libpthread.so.0 => /lib64/libpthread.so.0 (0x00002b2a7ec6b000) /lib64/ld-li*** (truncated on purpose) ***ux-x86-64.so.2 (0x00002b2a7d2f8000) libz.so.1 => /usr/local/lib/libz.so.1 (0x00002b2a7ee87000) liblzma.so.5 => /lib64/liblzma.so.5 (0x00002b2a7f0a2000) User's E-mail: *** (truncated on purpose) ***