List of reports associated
Test name: Version: 7.2.6
Goto: PHPInfo Build environment
PHPInfo
phpinfo()
PHP Version => 7.2.6
System => Linux login01.local 2.6.32-504.16.2.el6.x86_64 #1 SMP Wed Apr 22 06:48:29 UTC 2015 x86_64
Build Date => Jun 13 2018 10:20:41
Configure Command => './configure' '--prefix=/mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6' '--with-libxml-dir=/mnt/ilustre/users/yun.ding/newmdt/bin/libxml2/libxml2-2.9.8/'
Server API => Command Line Interface
Virtual Directory Support => disabled
Configuration File (php.ini) Path => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/lib
Loaded Configuration File => (none)
Scan this dir for additional .ini files => (none)
Additional .ini files parsed => (none)
PHP API => 20170718
PHP Extension => 20170718
Zend Extension => 320170718
Zend Extension Build => API320170718,NTS
PHP Extension Build => API20170718,NTS
Debug Build => no
Thread Safety => disabled
Zend Signal Handling => enabled
Zend Memory Manager => enabled
Zend Multibyte Support => disabled
IPv6 Support => enabled
DTrace Support => disabled
Registered PHP Streams => php, file, glob, data, http, ftp, phar
Registered Stream Socket Transports => tcp, udp, unix, udg
Registered Stream Filters => convert.iconv.*, string.rot13, string.toupper, string.tolower, string.strip_tags, convert.*, consumed, dechunk
This program makes use of the Zend Scripting Language Engine:
Zend Engine v3.2.0, Copyright (c) 1998-2018 Zend Technologies
_______________________________________________________________________
Configuration
Core
PHP Version => 7.2.6
Directive => Local Value => Master Value
allow_url_fopen => On => On
allow_url_include => Off => Off
arg_separator.input => & => &
arg_separator.output => & => &
auto_append_file => no value => no value
auto_globals_jit => On => On
auto_prepend_file => no value => no value
browscap => no value => no value
default_charset => UTF-8 => UTF-8
default_mimetype => text/html => text/html
disable_classes => no value => no value
disable_functions => no value => no value
display_errors => STDERR => STDERR
display_startup_errors => Off => Off
doc_root => no value => no value
docref_ext => no value => no value
docref_root => no value => no value
enable_dl => On => On
enable_post_data_reading => On => On
error_append_string => no value => no value
error_log => no value => no value
error_prepend_string => no value => no value
error_reporting => no value => no value
expose_php => On => On
extension_dir => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/lib/php/extensions/no-debug-non-zts-20170718 => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/lib/php/extensions/no-debug-non-zts-20170718
file_uploads => On => On
hard_timeout => 2 => 2
highlight.comment => <font style="color: #FF8000">#FF8000</font> => <font style="color: #FF8000">#FF8000</font>
highlight.default => <font style="color: #0000BB">#0000BB</font> => <font style="color: #0000BB">#0000BB</font>
highlight.html => <font style="color: #000000">#000000</font> => <font style="color: #000000">#000000</font>
highlight.keyword => <font style="color: #007700">#007700</font> => <font style="color: #007700">#007700</font>
highlight.string => <font style="color: #DD0000">#DD0000</font> => <font style="color: #DD0000">#DD0000</font>
html_errors => Off => Off
ignore_repeated_errors => Off => Off
ignore_repeated_source => Off => Off
ignore_user_abort => Off => Off
implicit_flush => On => On
include_path => .:/mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/lib/php => .:/mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/lib/php
input_encoding => no value => no value
internal_encoding => no value => no value
log_errors => Off => Off
log_errors_max_len => 1024 => 1024
mail.add_x_header => Off => Off
mail.force_extra_parameters => no value => no value
mail.log => no value => no value
max_execution_time => 0 => 0
max_file_uploads => 20 => 20
max_input_nesting_level => 64 => 64
max_input_time => -1 => -1
max_input_vars => 1000 => 1000
memory_limit => 128M => 128M
open_basedir => no value => no value
output_buffering => 0 => 0
output_encoding => no value => no value
output_handler => no value => no value
post_max_size => 8M => 8M
precision => 14 => 14
realpath_cache_size => 4096K => 4096K
realpath_cache_ttl => 120 => 120
register_argc_argv => On => On
report_memleaks => On => On
report_zend_debug => Off => Off
request_order => no value => no value
sendmail_from => no value => no value
sendmail_path => /usr/sbin/sendmail -t -i => /usr/sbin/sendmail -t -i
serialize_precision => -1 => -1
short_open_tag => On => On
SMTP => localhost => localhost
smtp_port => 25 => 25
sys_temp_dir => no value => no value
track_errors => Off => Off
unserialize_callback_func => no value => no value
upload_max_filesize => 2M => 2M
upload_tmp_dir => no value => no value
user_dir => no value => no value
user_ini.cache_ttl => 300 => 300
user_ini.filename => .user.ini => .user.ini
variables_order => EGPCS => EGPCS
xmlrpc_error_number => 0 => 0
xmlrpc_errors => Off => Off
zend.assertions => 1 => 1
zend.detect_unicode => On => On
zend.enable_gc => On => On
zend.multibyte => Off => Off
zend.script_encoding => no value => no value
zend.signal_check => Off => Off
ctype
ctype functions => enabled
date
date/time support => enabled
timelib version => 2017.06
"Olson" Timezone Database Version => 2018.5
Timezone Database => internal
Default timezone => UTC
Directive => Local Value => Master Value
date.default_latitude => 31.7667 => 31.7667
date.default_longitude => 35.2333 => 35.2333
date.sunrise_zenith => 90.583333 => 90.583333
date.sunset_zenith => 90.583333 => 90.583333
date.timezone => no value => no value
dom
DOM/XML => enabled
DOM/XML API Version => 20031129
libxml Version => 2.9.8
HTML Support => enabled
XPath Support => enabled
XPointer Support => enabled
Schema Support => enabled
RelaxNG Support => enabled
fileinfo
fileinfo support => enabled
version => 1.0.5
libmagic => 531
filter
Input Validation and Filtering => enabled
Revision => $Id: a4ca1e0a99c260cb8a4cf5d7369d130f7b934185 $
Directive => Local Value => Master Value
filter.default => unsafe_raw => unsafe_raw
filter.default_flags => no value => no value
hash
hash support => enabled
Hashing Engines => md2 md4 md5 sha1 sha224 sha256 sha384 sha512/224 sha512/256 sha512 sha3-224 sha3-256 sha3-384 sha3-512 ripemd128 ripemd160 ripemd256 ripemd320 whirlpool tiger128,3 tiger160,3 tiger192,3 tiger128,4 tiger160,4 tiger192,4 snefru snefru256 gost gost-crypto adler32 crc32 crc32b fnv132 fnv1a32 fnv164 fnv1a64 joaat haval128,3 haval160,3 haval192,3 haval224,3 haval256,3 haval128,4 haval160,4 haval192,4 haval224,4 haval256,4 haval128,5 haval160,5 haval192,5 haval224,5 haval256,5
iconv
iconv support => enabled
iconv implementation => glibc
iconv library version => 2.12
Directive => Local Value => Master Value
iconv.input_encoding => no value => no value
iconv.internal_encoding => no value => no value
iconv.output_encoding => no value => no value
json
json support => enabled
json version => 1.6.0
libxml
libXML support => active
libXML Compiled Version => 2.9.8
libXML Loaded Version => 20908
libXML streams => enabled
pcre
PCRE (Perl Compatible Regular Expressions) Support => enabled
PCRE Library Version => 8.41 2017-07-05
PCRE JIT Support => enabled
Directive => Local Value => Master Value
pcre.backtrack_limit => 1000000 => 1000000
pcre.jit => 1 => 1
pcre.recursion_limit => 100000 => 100000
PDO
PDO support => enabled
PDO drivers => sqlite
pdo_sqlite
PDO Driver for SQLite 3.x => enabled
SQLite Library => 3.20.1
Phar
Phar: PHP Archive support => enabled
Phar EXT version => 2.0.2
Phar API version => 1.1.1
SVN revision => $Id: 961be29fd3e2f5fe1458eb9c98adde5d37660d26 $
Phar-based phar archives => enabled
Tar-based phar archives => enabled
ZIP-based phar archives => enabled
gzip compression => disabled (install ext/zlib)
bzip2 compression => disabled (install pecl/bz2)
OpenSSL support => disabled (install ext/openssl)
Phar based on pear/PHP_Archive, original concept by Davey Shafik.
Phar fully realized by Gregory Beaver and Marcus Boerger.
Portions of tar implementation Copyright (c) 2003-2009 Tim Kientzle.
Directive => Local Value => Master Value
phar.cache_list => no value => no value
phar.readonly => On => On
phar.require_hash => On => On
posix
Revision => $Id: c3261323fa6808fa0c785f00c0741892d57ef0c4 $
Reflection
Reflection => enabled
Version => $Id: 991f0da341ffa07e5bf7e30e3718b33cf8b586a0 $
session
Session Support => enabled
Registered save handlers => files user
Registered serializer handlers => php_serialize php php_binary
Directive => Local Value => Master Value
session.auto_start => Off => Off
session.cache_expire => 180 => 180
session.cache_limiter => nocache => nocache
session.cookie_domain => no value => no value
session.cookie_httponly => 0 => 0
session.cookie_lifetime => 0 => 0
session.cookie_path => / => /
session.cookie_secure => 0 => 0
session.gc_divisor => 100 => 100
session.gc_maxlifetime => 1440 => 1440
session.gc_probability => 1 => 1
session.lazy_write => On => On
session.name => PHPSESSID => PHPSESSID
session.referer_check => no value => no value
session.save_handler => files => files
session.save_path => no value => no value
session.serialize_handler => php => php
session.sid_bits_per_character => 4 => 4
session.sid_length => 32 => 32
session.upload_progress.cleanup => On => On
session.upload_progress.enabled => On => On
session.upload_progress.freq => 1% => 1%
session.upload_progress.min_freq => 1 => 1
session.upload_progress.name => PHP_SESSION_UPLOAD_PROGRESS => PHP_SESSION_UPLOAD_PROGRESS
session.upload_progress.prefix => upload_progress_ => upload_progress_
session.use_cookies => 1 => 1
session.use_only_cookies => 1 => 1
session.use_strict_mode => 0 => 0
session.use_trans_sid => 0 => 0
SimpleXML
Simplexml support => enabled
Revision => $Id: 341daed0ee94ea8f728bfd0ba4626e6ed365c0d1 $
Schema support => enabled
SPL
SPL support => enabled
Interfaces => OuterIterator, RecursiveIterator, SeekableIterator, SplObserver, SplSubject
Classes => AppendIterator, ArrayIterator, ArrayObject, BadFunctionCallException, BadMethodCallException, CachingIterator, CallbackFilterIterator, DirectoryIterator, DomainException, EmptyIterator, FilesystemIterator, FilterIterator, GlobIterator, InfiniteIterator, InvalidArgumentException, IteratorIterator, LengthException, LimitIterator, LogicException, MultipleIterator, NoRewindIterator, OutOfBoundsException, OutOfRangeException, OverflowException, ParentIterator, RangeException, RecursiveArrayIterator, RecursiveCachingIterator, RecursiveCallbackFilterIterator, RecursiveDirectoryIterator, RecursiveFilterIterator, RecursiveIteratorIterator, RecursiveRegexIterator, RecursiveTreeIterator, RegexIterator, RuntimeException, SplDoublyLinkedList, SplFileInfo, SplFileObject, SplFixedArray, SplHeap, SplMinHeap, SplMaxHeap, SplObjectStorage, SplPriorityQueue, SplQueue, SplStack, SplTempFileObject, UnderflowException, UnexpectedValueException
sqlite3
SQLite3 support => enabled
SQLite3 module version => 7.2.6
SQLite Library => 3.20.1
Directive => Local Value => Master Value
sqlite3.extension_dir => no value => no value
standard
Dynamic Library Support => enabled
Path to sendmail => /usr/sbin/sendmail -t -i
Directive => Local Value => Master Value
assert.active => 1 => 1
assert.bail => 0 => 0
assert.callback => no value => no value
assert.exception => 0 => 0
assert.quiet_eval => 0 => 0
assert.warning => 1 => 1
auto_detect_line_endings => 0 => 0
default_socket_timeout => 60 => 60
from => no value => no value
session.trans_sid_hosts => no value => no value
session.trans_sid_tags => a=href,area=href,frame=src,form= => a=href,area=href,frame=src,form=
url_rewriter.hosts => no value => no value
url_rewriter.tags => form= => form=
user_agent => no value => no value
tokenizer
Tokenizer Support => enabled
xml
XML Support => active
XML Namespace Support => active
libxml2 Version => 2.9.8
xmlreader
XMLReader => enabled
xmlwriter
XMLWriter => enabled
Additional Modules
Module Name
Environment
Variable => Value
CPLUS_INCLUDE_PATH => /mnt/ilustre/users/meta/Base/gcc5/include:/mnt/ilustre/users/meta/Base/include:/mnt/ilustre/users/meta/Base/python-2.7.10/include
PDSHROOT => /opt/pdsh
MANPATH => /opt/torque/man:
HOSTNAME => login01.local
TEST_PHP_SRCDIR => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6
SHELL => /bin/bash
TERM => xterm
MAKEFLAGS =>
HISTSIZE => 1000
SSH_CLIENT => deleted
TEST_PHPDBG_EXECUTABLE => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/sapi/phpdbg/phpdbg
LIBRARY_PATH => /mnt/ilustre/users/meta/Base/lib:/mnt/ilustre/users/meta/Base/zlib-1.2.8:/mnt/ilustre/app/pub/lib:/mnt/ilustre/app/pub/lib64:/mnt/ilustre/app/pub/R-3.2.1/lib/:
PERL5LIB => /mnt/ilustre/users/meta/Base/perl-5.10.0/lib/site_perl/5.10.0:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/5.10.0/x86_64-linux-thread-multi:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/site_perl/5.10.0/x86_64-linux-thread-multi::/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/5.10.0/x86_64-linux-thread-multi:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/5.10.0:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/site_perl/5.10.0/x86_64-linux-thread-multi:/mnt/ilustre/users/meta/Database/Pfam/PfamScan:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe/perl5lib:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/5.10.0/x86_64-linux-thread-multi:/opt/perl/lib/site_perl/5.14.2/x86_64-linux-thread-multi
QTDIR => /usr/lib64/qt-3.3
QTINC => /usr/lib64/qt-3.3/include
SSH_TTY => deleted
ANT_HOME => /opt/rocks
LC_ALL => zh_CN.UTF-8
USER => yun.ding
LS_COLORS => rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.tbz=01;31:*.tbz2=01;31:*.bz=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:
LD_LIBRARY_PATH => /mnt/ilustre/users/yun.ding/bin/anaconda2/lib:/mnt/ilustre/users/yun.ding/bin/anaconda2/lib:/mnt/ilustre/users/yun.ding/bin/anaconda2/bin/python2.7/:/mnt/ilustre/users/yun.ding/bin/anaconda2/lib:/mnt/ilustre/users/meta/Base/lib:/mnt/ilustre/users/meta/Base/lib64:/mnt/ilustre/users/meta/Base/zlib-1.2.8:/mnt/ilustre/app/pub/lib:/mnt/ilustre/app/pub/gcc/4.9.2/lib64:/lib64:/mnt/ilustre/users/hao.gao/Software/zlib-1.2.7/lib:/mnt/ilustre/users/meta/Base/lib:/mnt/ilustre/users/meta/local/libxml2/lib:/mnt/ilustre/users/meta/zlib/lib:/mnt/ilustre/users/meta/Base/zlib-1.2.8:/mnt/ilustre/app/pub/intel2013/lib/intel64:/usr/lib64:/mnt/ilustre/users/meta/tcl8.6.6/lib:/mnt/ilustre/users/meta/tk8.6.6/lib:/mnt/ilustre/users/meta/Base/python/lib:/mnt/ilustre/app/pub/gcc5/lib:/mnt/ilustre/app/pub/gcc5/lib64:/mnt/ilustre/app/pub/lib:/mnt/ilustre/app/pub/lib64:/mnt/ilustre/app/pub/python-2.7.10-new/lib:/mnt/ilustre/app/pub/R-3.2.1/lib/:/opt/openmpi/lib:/opt/python/lib:/mnt/ilustre/app/pub/bzip2-1.0.6
ROCKS_ROOT => /opt/rocks
SSH_AUTH_SOCK => deleted
QT_PATH => /mnt/ilustre/users/meta/qt-4.8.1/bin:
MAKELEVEL => 1
MFLAGS =>
PATH => /mnt/ilustre/users/yun.ding/newmdt/scripts/fx_test:/mnt/ilustre/users/yun.ding/bin/anaconda2/bin:/mnt/ilustre/users/ling.he/meta/software/centrifuge/centrifuge-master/bin:/mnt/ilustre/users/meta/Softwares/hmmer-3.1b2-linux-intel-x86_64/binaries:/mnt/ilustre/users/meta/Softwares:/mnt/ilustre/users/zhenyong.han/software/Mash/Mash-master/bin/:/mnt/ilustre/users/ling.he/meta/software/gANI/ANIcalculator_v1:/mnt/ilustre/users/yun.ding/newmdt/scripts/fx_test:/mnt/ilustre/users/yun.ding/newmdt/bin/phantomjs-2.1.1-linux-x86_64/bin/:/mnt/ilustre/users/yun.ding/newmdt/bin/chromedriver/:/mnt/ilustre/users/yun.ding/newmdt/bin/chrome/usr/bin/:/mnt/ilustre/users/ling.he/meta/software/centrifuge/centrifuge-master/bin:/mnt/ilustre/users/meta/Softwares/hmmer-3.1b2-linux-intel-x86_64/binaries:/mnt/ilustre/users/meta/Softwares:/mnt/ilustre/users/zhenyong.han/software/Mash/Mash-master/bin/:/mnt/ilustre/users/ling.he/meta/software/gANI/ANIcalculator_v1:/mnt/ilustre/users/meta/Softwares/tophat-2.1.1.Linux_x86_64:/mnt/ilustre/users/meta/Softwares/MaxBin-2.2.1/auxiliary/idba-1.1.1/bin:/mnt/ilustre/users/meta/Softwares/MaxBin-2.2.1:/mnt/ilustre/users/meta/Softwares/FragGeneScan1.30:/mnt/ilustre/users/meta/454-newbler/bin:/mnt/ilustre/users/meta/AMOS/bin:/mnt/ilustre/users/meta/Softwares/MUMmer3.23:/mnt/ilustre/users/meta/local/454_newbler/bin:/mnt/ilustre/app/meta/bcl2fastq-2.17/bin:/mnt/ilustre/users/meta/SRC/Krona-2.6/KronaTools/bin:/mnt/ilustre/app/rna/sequence_tool/samtools-0.1.18:/mnt/ilustre/users/meta/Softwares/convmv-1.14:/mnt/ilustre/users/meta/Scripts/Diversity/miseq-data-split/diversity/V6:/mnt/ilustre/users/meta/Scripts/Diversity/meta_pipe:/mnt/ilustre/users/meta/Scripts/Diversity/meta_pipe/bin:/mnt/ilustre/users/meta/Softwares/ncbi-blast-2.2.31+/bin:/mnt/ilustre/app/meta/Softwares/Mothur.1.30.2:/mnt/ilustre/users/meta/Base/R-3.2.2/bin:/mnt/ilustre/app/meta/bin/convert:/mnt/ilustre/users/meta/bin/bin:/mnt/ilustre/users/meta/Softwares/Qiime/clearcut-1.0.9-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/raxml-7.3.0-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/blat-34-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/cdbtools-10.11.2010-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/rtax-0.984-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/cytoscape-2.7.0-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/chimeraslayer-4.29.2010-release/NAST-iEr:/mnt/ilustre/users/meta/Softwares/Qiime/chimeraslayer-4.29.2010-release/ChimeraSlayer:/mnt/ilustre/users/meta/Softwares/Qiime/drisee-1.2-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/infernal-1.0.2-release/bin:/mnt/ilustre/users/meta/Softwares/Qiime/vienna-1.8.4-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/mothur-1.25.0-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/bwa-0.6.2-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/blast-2.2.22-release/bin:/mnt/ilustre/users/meta/Softwares/Qiime/SeqPrep-v1.1-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/muscle-3.8.31-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/rdpclassifier-2.2-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/cdhit-3.1-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/sourcetracker-1.0.0-release/.:/mnt/ilustre/users/meta/Softwares/bin/:/mnt/ilustre/users/hao.gao/local/:/mnt/ilustre/users/hao.gao/Software/barrnap-0.6/bin:/mnt/ilustre/users/meta/Softwares/gnuplot/bin:/mnt/ilustre/users/meta/Scripts/Metagenomics/metagenome_pipe_v1/download/scons/bin:/mnt/ilustre/users/meta/Softwares/emboss-6.5.7/bin:/mnt/ilustre/users/meta/Softwares/metagene:/mnt/ilustre/users/meta/Softwares/sortmerna-2.0:/mnt/ilustre/users/meta/Softwares/bwa-0.6.2-release:/mnt/ilustre/users/meta/Softwares/sickle:/mnt/ilustre/users/meta/Softwares/SeqPrep-v1.1-release:/mnt/ilustre/users/meta/Softwares/jellyfish-1.1.11/bin:/mnt/ilustre/users/meta/Softwares/kraken-0.10.5-beta/install_dir:/mnt/ilustre/users/meta/Softwares/bowtie-1.1.1:/mnt/ilustre/users/meta/Softwares/bowtie2-2.2.5:/mnt/ilustre/users/meta/Softwares/hmmscan:/mnt/ilustre/users/meta/Softwares/SOAPdenovo2/bin:/mnt/ilustre/users/meta/Scripts/Metagenomics/metagenome_pipe_v1:/mnt/ilustre/users/meta/Scripts/Metagenomics/metagenome_pipe_v1/bin:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe/trinityrnaseq_r20140413/util:/mnt/ilustre/users/meta/Scripts/meta_omics:/mnt/ilustre/users/meta/Scripts/meta_omics/bin:/mnt/ilustre/users/meta/Scripts/Pacbio:/mnt/ilustre/users/meta/Scripts/Pacbio/bin:/mnt/ilustre/users/meta/Scripts/Tools:/mnt/ilustre/users/meta/Scripts/OPU:/mnt/ilustre/users/meta/Base/perl-5.10.0/bin:/mnt/ilustre/users/meta/Base/python/bin:/mnt/ilustre/users/meta/Base/python-2.7.10/bin:/mnt/ilustre/users/huimin.zhang/usr/bin:/mnt/ilustre/app/pub/gcc/4.9.2/bin:/bin:/mnt/ilustre/app/pub/gcc5/bin:/mnt/ilustre/app/pub/perl/5.10.1/bin:/mnt/ilustre/app/pub/bin:/mnt/ilustre/app/pub/emboss-6.5.7/bin:/mnt/ilustre/app/meta/bcl2fastq/bcl2fastq2-v2.16/bin:/mnt/ilustre/app/pub/python-2.7.10-new/bin:/opt/openmpi/bin:/usr/lib64/qt-3.3/bin:/mnt/ilustre/app/pub/python-2.7/bin:/mnt/ilustre/app/pub/gcc/gcc-4.8.4/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/ganglia/bin:/opt/ganglia/sbin:/opt/ibutils/bin:/usr/java/latest/bin:/opt/maui/bin:/opt/torque/bin:/opt/torque/sbin:/opt/pdsh/bin:/opt/rocks/bin:/opt/rocks/sbin:/mnt/ilustre/users/meta/Base/perl-5.10.0/bin:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe/kobas/kobas2.0-20150126/scripts:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe/goatools-master/scripts:/mnt/ilustre/app/zhuohao/software/kobas2.0/20150126/scripts:/mnt/ilustre/users/meta/Softwares:/mnt/ilustre/users/meta/Softwares/CibioCM-export2graphlan-7b5795b03c55:/mnt/ilustre/users/meta/Softwares/nsegata-graphlan-3a3ee4605c23:/mnt/ilustre/users/meta/Softwares/micropita:/mnt/ilustre/users/meta/Softwares/glimmer3.02/bin:/mnt/ilustre/users/meta/Softwares/GlimmerHMM/bin:/mnt/ilustre/users/meta/Softwares/hmmer-3.1b2-linux-intel-x86_64/bin:/mnt/ilustre/users/meta/Softwares/diamond:/mnt/ilustre/users/meta/Softwares/prodigal:/mnt/ilustre/users/meta/Softwares/hmmer-3.1b2-linux-intel-x86_64/bin:/mnt/ilustre/users/meta/Softwares:/mnt/ilustre/users/meta/Softwares/AMPHORA2-master/Scripts:/mnt/ilustre/users/meta/Softwares/standard-RAxML:/mnt/ilustre/users/meta/Softwares/mega7:/mnt/ilustre/users/meta/bin/mafft/bin:/mnt/ilustre/users/meta/Softwares/megahit:/mnt/ilustre/users//yun.ding/bin
MAIL => /var/spool/mail/yun.ding
_ => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/sapi/cli/php
ZLIB => /mnt/ilustre/users/meta/Base/zlib-1.2.8
C_INCLUDE_PATH => /mnt/ilustre/users/hao.gao/Software/zlib-1.2.7/include:/usr/include/:/opt/rocks/include:/mnt/ilustre/users/meta/Base/gcc5/include:/opt/rocks/include:/mnt/ilustre/users/meta/Base/include:/mnt/ilustre/users/meta/zlib/include:/mnt/ilustre/users/meta/local/libxml2/include:/mnt/ilustre/users/meta/Base/python-2.7.10/include
BOOST_INCLUDE => /mnt/ilustre/users/meta/boot_1_62/include:
PWD => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6
JAVA_HOME => /usr/java/latest
_LMFILES_ => /usr/share/Modules/modulefiles/rocks-openmpi
TCLLIBPATH => /mnt/ilustre/users/meta/tcl8.6.6/lib:
LANG => zh_CN.UTF-8
TEST_PHP_EXECUTABLE => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/sapi/cli/php
MODULEPATH => /usr/share/Modules/modulefiles:/etc/modulefiles
LOADEDMODULES => rocks-openmpi
LIB_QT_PATH => /mnt/ilustre/users/meta/qt-4.8.1/lib:
QIIME_CONFIG_FP => /mnt/ilustre/users/meta/Softwares/Qiime/qiime_config
BOOST_LIB => /mnt/ilustre/users/meta/boot_1_62/lib:
HISTCONTROL => ignoredups
SSH_ASKPASS => /usr/libexec/openssh/gnome-ssh-askpass
HOME => /mnt/ilustre/users//yun.ding
SHLVL => 3
MPIHOME => /opt/openmpi
LOGNAME => yun.ding
PYTHONPATH => /mnt/ilustre/users/yun.ding/bin/anaconda2/bin:/mnt/ilustre/users/yun.ding/bin/anaconda2/bin:/mnt/ilustre/users/ling.he/meta/software/centrifuge/centrifuge-master/bin:/mnt/ilustre/users/meta/Softwares/hmmer-3.1b2-linux-intel-x86_64/binaries:/mnt/ilustre/users/meta/Softwares:/mnt/ilustre/users/zhenyong.han/software/Mash/Mash-master/bin/:/mnt/ilustre/users/ling.he/meta/software/gANI/ANIcalculator_v1:/mnt/ilustre/users/yun.ding/newmdt/scripts/fx_test:/mnt/ilustre/users/yun.ding/newmdt/bin/phantomjs-2.1.1-linux-x86_64/bin/:/mnt/ilustre/users/yun.ding/newmdt/bin/chromedriver/:/mnt/ilustre/users/yun.ding/newmdt/bin/chrome/usr/bin/:/mnt/ilustre/users/ling.he/meta/software/centrifuge/centrifuge-master/bin:/mnt/ilustre/users/meta/Softwares/hmmer-3.1b2-linux-intel-x86_64/binaries:/mnt/ilustre/users/meta/Softwares:/mnt/ilustre/users/zhenyong.han/software/Mash/Mash-master/bin/:/mnt/ilustre/users/ling.he/meta/software/gANI/ANIcalculator_v1:/mnt/ilustre/users/meta/Softwares/tophat-2.1.1.Linux_x86_64:/mnt/ilustre/users/meta/Softwares/MaxBin-2.2.1/auxiliary/idba-1.1.1/bin:/mnt/ilustre/users/meta/Softwares/MaxBin-2.2.1:/mnt/ilustre/users/meta/Softwares/FragGeneScan1.30:/mnt/ilustre/users/meta/454-newbler/bin:/mnt/ilustre/users/meta/AMOS/bin:/mnt/ilustre/users/meta/Softwares/MUMmer3.23:/mnt/ilustre/users/meta/local/454_newbler/bin:/mnt/ilustre/app/meta/bcl2fastq-2.17/bin:/mnt/ilustre/users/meta/SRC/Krona-2.6/KronaTools/bin:/mnt/ilustre/app/rna/sequence_tool/samtools-0.1.18:/mnt/ilustre/users/meta/Softwares/convmv-1.14:/mnt/ilustre/users/meta/Scripts/Diversity/miseq-data-split/diversity/V6:/mnt/ilustre/users/meta/Scripts/Diversity/meta_pipe:/mnt/ilustre/users/meta/Scripts/Diversity/meta_pipe/bin:/mnt/ilustre/users/meta/Softwares/ncbi-blast-2.2.31+/bin:/mnt/ilustre/app/meta/Softwares/Mothur.1.30.2:/mnt/ilustre/users/meta/Base/R-3.2.2/bin:/mnt/ilustre/app/meta/bin/convert:/mnt/ilustre/users/meta/bin/bin:/mnt/ilustre/users/meta/Softwares/Qiime/clearcut-1.0.9-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/raxml-7.3.0-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/blat-34-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/cdbtools-10.11.2010-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/rtax-0.984-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/cytoscape-2.7.0-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/chimeraslayer-4.29.2010-release/NAST-iEr:/mnt/ilustre/users/meta/Softwares/Qiime/chimeraslayer-4.29.2010-release/ChimeraSlayer:/mnt/ilustre/users/meta/Softwares/Qiime/drisee-1.2-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/infernal-1.0.2-release/bin:/mnt/ilustre/users/meta/Softwares/Qiime/vienna-1.8.4-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/mothur-1.25.0-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/bwa-0.6.2-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/blast-2.2.22-release/bin:/mnt/ilustre/users/meta/Softwares/Qiime/SeqPrep-v1.1-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/muscle-3.8.31-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/rdpclassifier-2.2-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/cdhit-3.1-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/sourcetracker-1.0.0-release/.:/mnt/ilustre/users/meta/Softwares/bin/:/mnt/ilustre/users/hao.gao/local/:/mnt/ilustre/users/hao.gao/Software/barrnap-0.6/bin:/mnt/ilustre/users/meta/Softwares/gnuplot/bin:/mnt/ilustre/users/meta/Scripts/Metagenomics/metagenome_pipe_v1/download/scons/bin:/mnt/ilustre/users/meta/Softwares/emboss-6.5.7/bin:/mnt/ilustre/users/meta/Softwares/metagene:/mnt/ilustre/users/meta/Softwares/sortmerna-2.0:/mnt/ilustre/users/meta/Softwares/bwa-0.6.2-release:/mnt/ilustre/users/meta/Softwares/sickle:/mnt/ilustre/users/meta/Softwares/SeqPrep-v1.1-release:/mnt/ilustre/users/meta/Softwares/jellyfish-1.1.11/bin:/mnt/ilustre/users/meta/Softwares/kraken-0.10.5-beta/install_dir:/mnt/ilustre/users/meta/Softwares/bowtie-1.1.1:/mnt/ilustre/users/meta/Softwares/bowtie2-2.2.5:/mnt/ilustre/users/meta/Softwares/hmmscan:/mnt/ilustre/users/meta/Softwares/SOAPdenovo2/bin:/mnt/ilustre/users/meta/Scripts/Metagenomics/metagenome_pipe_v1:/mnt/ilustre/users/meta/Scripts/Metagenomics/metagenome_pipe_v1/bin:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe/trinityrnaseq_r20140413/util:/mnt/ilustre/users/meta/Scripts/meta_omics:/mnt/ilustre/users/meta/Scripts/meta_omics/bin:/mnt/ilustre/users/meta/Scripts/Pacbio:/mnt/ilustre/users/meta/Scripts/Pacbio/bin:/mnt/ilustre/users/meta/Scripts/Tools:/mnt/ilustre/users/meta/Scripts/OPU:/mnt/ilustre/users/meta/Base/perl-5.10.0/bin:/mnt/ilustre/users/meta/Base/python/bin:/mnt/ilustre/users/meta/Base/python-2.7.10/bin:/mnt/ilustre/users/huimin.zhang/usr/bin:/mnt/ilustre/app/pub/gcc/4.9.2/bin:/bin:/mnt/ilustre/app/pub/gcc5/bin:/mnt/ilustre/app/pub/perl/5.10.1/bin:/mnt/ilustre/app/pub/bin:/mnt/ilustre/app/pub/emboss-6.5.7/bin:/mnt/ilustre/app/meta/bcl2fastq/bcl2fastq2-v2.16/bin:/mnt/ilustre/app/pub/python-2.7.10-new/bin:/opt/openmpi/bin:/usr/lib64/qt-3.3/bin:/mnt/ilustre/app/pub/python-2.7/bin:/mnt/ilustre/app/pub/gcc/gcc-4.8.4/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/ganglia/bin:/opt/ganglia/sbin:/opt/ibutils/bin:/usr/java/latest/bin:/opt/maui/bin:/opt/torque/bin:/opt/torque/sbin:/opt/pdsh/bin:/opt/rocks/bin:/opt/rocks/sbin:/mnt/ilustre/users/meta/Base/perl-5.10.0/bin:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe/kobas/kobas2.0-20150126/scripts:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe/goatools-master/scripts:/mnt/ilustre/app/zhuohao/software/kobas2.0/20150126/scripts:/mnt/ilustre/users/meta/Softwares:/mnt/ilustre/users/meta/Softwares/CibioCM-export2graphlan-7b5795b03c55:/mnt/ilustre/users/meta/Softwares/nsegata-graphlan-3a3ee4605c23:/mnt/ilustre/users/meta/Softwares/micropita:/mnt/ilustre/users/meta/Softwares/glimmer3.02/bin:/mnt/ilustre/users/meta/Softwares/GlimmerHMM/bin:/mnt/ilustre/users/meta/Softwares/hmmer-3.1b2-linux-intel-x86_64/bin:/mnt/ilustre/users/meta/Softwares/diamond:/mnt/ilustre/users/meta/Softwares/prodigal:/mnt/ilustre/users/meta/Softwares/hmmer-3.1b2-linux-intel-x86_64/bin:/mnt/ilustre/users/meta/Softwares:/mnt/ilustre/users/meta/Softwares/AMPHORA2-master/Scripts:/mnt/ilustre/users/meta/Softwares/standard-RAxML:/mnt/ilustre/users/meta/Softwares/mega7:/mnt/ilustre/users/meta/bin/mafft/bin:/mnt/ilustre/users/meta/Softwares/megahit:/mnt/ilustre/users//yun.ding/bin
PYTHONLIB => /mnt/ilustre/users/yun.ding/bin/anaconda2/lib/python2.7/site-packages:
QTLIB => /usr/lib64/qt-3.3/lib
CVS_RSH => ssh
SSH_CONNECTION => deleted
MODULESHOME => /usr/share/Modules
LESSOPEN => ||/usr/bin/lesspipe.sh %s
BLASTMAT => /mnt/ilustre/users/meta/Softwares/Qiime/blast-2.2.22-release/data
SOURCETRACKER_PATH => /mnt/ilustre/users/meta/Softwares/Qiime/sourcetracker-1.0.0-release/.
DISPLAY => localhost:54.0
RDP_JAR_PATH => /mnt/ilustre/users/meta/Softwares/Qiime/rdpclassifier-2.2-release/rdp_classifier-2.2.jar
CC => cc
G_BROKEN_FILENAMES => 1
OMPI_MCA_btl => self,sm,tcp
BASH_FUNC_module() => () { eval `/usr/bin/modulecmd bash $*`
}
PHP Variables
Variable => Value
$_SERVER['CPLUS_INCLUDE_PATH'] => /mnt/ilustre/users/meta/Base/gcc5/include:/mnt/ilustre/users/meta/Base/include:/mnt/ilustre/users/meta/Base/python-2.7.10/include
$_SERVER['PDSHROOT'] => /opt/pdsh
$_SERVER['MANPATH'] => /opt/torque/man:
$_SERVER['HOSTNAME'] => login01.local
$_SERVER['TEST_PHP_SRCDIR'] => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6
$_SERVER['SHELL'] => /bin/bash
$_SERVER['TERM'] => xterm
$_SERVER['MAKEFLAGS'] =>
$_SERVER['HISTSIZE'] => 1000
$_SERVER['SSH_CLIENT'] => deleted
$_SERVER['TEST_PHPDBG_EXECUTABLE'] => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/sapi/phpdbg/phpdbg
$_SERVER['LIBRARY_PATH'] => /mnt/ilustre/users/meta/Base/lib:/mnt/ilustre/users/meta/Base/zlib-1.2.8:/mnt/ilustre/app/pub/lib:/mnt/ilustre/app/pub/lib64:/mnt/ilustre/app/pub/R-3.2.1/lib/:
$_SERVER['PERL5LIB'] => /mnt/ilustre/users/meta/Base/perl-5.10.0/lib/site_perl/5.10.0:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/5.10.0/x86_64-linux-thread-multi:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/site_perl/5.10.0/x86_64-linux-thread-multi::/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/5.10.0/x86_64-linux-thread-multi:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/5.10.0:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/site_perl/5.10.0/x86_64-linux-thread-multi:/mnt/ilustre/users/meta/Database/Pfam/PfamScan:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe/perl5lib:/mnt/ilustre/users/meta/Base/perl-5.10.0/lib/5.10.0/x86_64-linux-thread-multi:/opt/perl/lib/site_perl/5.14.2/x86_64-linux-thread-multi
$_SERVER['QTDIR'] => /usr/lib64/qt-3.3
$_SERVER['QTINC'] => /usr/lib64/qt-3.3/include
$_SERVER['SSH_TTY'] => deleted
$_SERVER['ANT_HOME'] => /opt/rocks
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$_ENV['MAIL'] => /var/spool/mail/yun.ding
$_ENV['_'] => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/sapi/cli/php
$_ENV['ZLIB'] => /mnt/ilustre/users/meta/Base/zlib-1.2.8
$_ENV['C_INCLUDE_PATH'] => /mnt/ilustre/users/hao.gao/Software/zlib-1.2.7/include:/usr/include/:/opt/rocks/include:/mnt/ilustre/users/meta/Base/gcc5/include:/opt/rocks/include:/mnt/ilustre/users/meta/Base/include:/mnt/ilustre/users/meta/zlib/include:/mnt/ilustre/users/meta/local/libxml2/include:/mnt/ilustre/users/meta/Base/python-2.7.10/include
$_ENV['BOOST_INCLUDE'] => /mnt/ilustre/users/meta/boot_1_62/include:
$_ENV['PWD'] => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6
$_ENV['JAVA_HOME'] => /usr/java/latest
$_ENV['_LMFILES_'] => /usr/share/Modules/modulefiles/rocks-openmpi
$_ENV['TCLLIBPATH'] => /mnt/ilustre/users/meta/tcl8.6.6/lib:
$_ENV['LANG'] => zh_CN.UTF-8
$_ENV['TEST_PHP_EXECUTABLE'] => /mnt/ilustre/users/yun.ding/newmdt/bin/php/php-7.2.6/sapi/cli/php
$_ENV['MODULEPATH'] => /usr/share/Modules/modulefiles:/etc/modulefiles
$_ENV['LOADEDMODULES'] => rocks-openmpi
$_ENV['LIB_QT_PATH'] => /mnt/ilustre/users/meta/qt-4.8.1/lib:
$_ENV['QIIME_CONFIG_FP'] => /mnt/ilustre/users/meta/Softwares/Qiime/qiime_config
$_ENV['BOOST_LIB'] => /mnt/ilustre/users/meta/boot_1_62/lib:
$_ENV['HISTCONTROL'] => ignoredups
$_ENV['SSH_ASKPASS'] => /usr/libexec/openssh/gnome-ssh-askpass
$_ENV['HOME'] => /mnt/ilustre/users//yun.ding
$_ENV['SHLVL'] => 3
$_ENV['MPIHOME'] => /opt/openmpi
$_ENV['LOGNAME'] => yun.ding
$_ENV['PYTHONPATH'] => /mnt/ilustre/users/yun.ding/bin/anaconda2/bin:/mnt/ilustre/users/yun.ding/bin/anaconda2/bin:/mnt/ilustre/users/ling.he/meta/software/centrifuge/centrifuge-master/bin:/mnt/ilustre/users/meta/Softwares/hmmer-3.1b2-linux-intel-x86_64/binaries:/mnt/ilustre/users/meta/Softwares:/mnt/ilustre/users/zhenyong.han/software/Mash/Mash-master/bin/:/mnt/ilustre/users/ling.he/meta/software/gANI/ANIcalculator_v1:/mnt/ilustre/users/yun.ding/newmdt/scripts/fx_test:/mnt/ilustre/users/yun.ding/newmdt/bin/phantomjs-2.1.1-linux-x86_64/bin/:/mnt/ilustre/users/yun.ding/newmdt/bin/chromedriver/:/mnt/ilustre/users/yun.ding/newmdt/bin/chrome/usr/bin/:/mnt/ilustre/users/ling.he/meta/software/centrifuge/centrifuge-master/bin:/mnt/ilustre/users/meta/Softwares/hmmer-3.1b2-linux-intel-x86_64/binaries:/mnt/ilustre/users/meta/Softwares:/mnt/ilustre/users/zhenyong.han/software/Mash/Mash-master/bin/:/mnt/ilustre/users/ling.he/meta/software/gANI/ANIcalculator_v1:/mnt/ilustre/users/meta/Softwares/tophat-2.1.1.Linux_x86_64:/mnt/ilustre/users/meta/Softwares/MaxBin-2.2.1/auxiliary/idba-1.1.1/bin:/mnt/ilustre/users/meta/Softwares/MaxBin-2.2.1:/mnt/ilustre/users/meta/Softwares/FragGeneScan1.30:/mnt/ilustre/users/meta/454-newbler/bin:/mnt/ilustre/users/meta/AMOS/bin:/mnt/ilustre/users/meta/Softwares/MUMmer3.23:/mnt/ilustre/users/meta/local/454_newbler/bin:/mnt/ilustre/app/meta/bcl2fastq-2.17/bin:/mnt/ilustre/users/meta/SRC/Krona-2.6/KronaTools/bin:/mnt/ilustre/app/rna/sequence_tool/samtools-0.1.18:/mnt/ilustre/users/meta/Softwares/convmv-1.14:/mnt/ilustre/users/meta/Scripts/Diversity/miseq-data-split/diversity/V6:/mnt/ilustre/users/meta/Scripts/Diversity/meta_pipe:/mnt/ilustre/users/meta/Scripts/Diversity/meta_pipe/bin:/mnt/ilustre/users/meta/Softwares/ncbi-blast-2.2.31+/bin:/mnt/ilustre/app/meta/Softwares/Mothur.1.30.2:/mnt/ilustre/users/meta/Base/R-3.2.2/bin:/mnt/ilustre/app/meta/bin/convert:/mnt/ilustre/users/meta/bin/bin:/mnt/ilustre/users/meta/Softwares/Qiime/clearcut-1.0.9-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/raxml-7.3.0-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/blat-34-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/cdbtools-10.11.2010-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/rtax-0.984-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/cytoscape-2.7.0-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/chimeraslayer-4.29.2010-release/NAST-iEr:/mnt/ilustre/users/meta/Softwares/Qiime/chimeraslayer-4.29.2010-release/ChimeraSlayer:/mnt/ilustre/users/meta/Softwares/Qiime/drisee-1.2-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/infernal-1.0.2-release/bin:/mnt/ilustre/users/meta/Softwares/Qiime/vienna-1.8.4-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/mothur-1.25.0-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/bwa-0.6.2-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/blast-2.2.22-release/bin:/mnt/ilustre/users/meta/Softwares/Qiime/SeqPrep-v1.1-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/muscle-3.8.31-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/rdpclassifier-2.2-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/cdhit-3.1-release/.:/mnt/ilustre/users/meta/Softwares/Qiime/sourcetracker-1.0.0-release/.:/mnt/ilustre/users/meta/Softwares/bin/:/mnt/ilustre/users/hao.gao/local/:/mnt/ilustre/users/hao.gao/Software/barrnap-0.6/bin:/mnt/ilustre/users/meta/Softwares/gnuplot/bin:/mnt/ilustre/users/meta/Scripts/Metagenomics/metagenome_pipe_v1/download/scons/bin:/mnt/ilustre/users/meta/Softwares/emboss-6.5.7/bin:/mnt/ilustre/users/meta/Softwares/metagene:/mnt/ilustre/users/meta/Softwares/sortmerna-2.0:/mnt/ilustre/users/meta/Softwares/bwa-0.6.2-release:/mnt/ilustre/users/meta/Softwares/sickle:/mnt/ilustre/users/meta/Softwares/SeqPrep-v1.1-release:/mnt/ilustre/users/meta/Softwares/jellyfish-1.1.11/bin:/mnt/ilustre/users/meta/Softwares/kraken-0.10.5-beta/install_dir:/mnt/ilustre/users/meta/Softwares/bowtie-1.1.1:/mnt/ilustre/users/meta/Softwares/bowtie2-2.2.5:/mnt/ilustre/users/meta/Softwares/hmmscan:/mnt/ilustre/users/meta/Softwares/SOAPdenovo2/bin:/mnt/ilustre/users/meta/Scripts/Metagenomics/metagenome_pipe_v1:/mnt/ilustre/users/meta/Scripts/Metagenomics/metagenome_pipe_v1/bin:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe:/mnt/ilustre/users/meta/Scripts/Metatranscriptomics/metatranscriptome_pipe_v1/pipe/trinityrnaseq_r20140413/util:/mnt/ilustre/users/meta/Scripts/meta_omics:/mnt/ilustre/users/meta/Scripts/meta_omics/bin:/mnt/ilustre/users/meta/Scripts/Pacbio:/mnt/ilustre/users/meta/Scripts/Pacbio/bin:/mnt/ilustre/users/meta/Scripts/Tools:/mnt/ilustre/users/meta/Scripts/OPU:/mnt/ilustre/users/meta/Base/perl-5.10.0/bin:/mnt/ilustre/users/meta/Base/python/bin:/mnt/ilustre/users/meta/Base/python-2.7.10/bin:/mnt/ilustre/users/huimin.zhang/usr/bin:/mnt/ilustre/app/pub/gcc/4.9.2/bin:/bin:/mnt/ilustre/app/pub/gcc5/bin:/mnt/ilustre/app/pub/perl/5.10.1/bin:/mnt/ilustre/app/pub/bin:/mnt/ilustre/app/pub/embo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$_ENV['PYTHONLIB'] => /mnt/ilustre/users/yun.ding/bin/anaconda2/lib/python2.7/site-packages:
$_ENV['QTLIB'] => /usr/lib64/qt-3.3/lib
$_ENV['CVS_RSH'] => ssh
$_ENV['SSH_CONNECTION'] => deleted
$_ENV['MODULESHOME'] => /usr/share/Modules
$_ENV['LESSOPEN'] => ||/usr/bin/lesspipe.sh %s
$_ENV['BLASTMAT'] => /mnt/ilustre/users/meta/Softwares/Qiime/blast-2.2.22-release/data
$_ENV['SOURCETRACKER_PATH'] => /mnt/ilustre/users/meta/Softwares/Qiime/sourcetracker-1.0.0-release/.
$_ENV['DISPLAY'] => localhost:54.0
$_ENV['RDP_JAR_PATH'] => /mnt/ilustre/users/meta/Softwares/Qiime/rdpclassifier-2.2-release/rdp_classifier-2.2.jar
$_ENV['CC'] => cc
$_ENV['G_BROKEN_FILENAMES'] => 1
$_ENV['OMPI_MCA_btl'] => self,sm,tcp
$_ENV['BASH_FUNC_module()'] => () { eval `/usr/bin/modulecmd bash $*`
}
PHP License
This program is free software; you can redistribute it and/or modify
it under the terms of the PHP License as published by the PHP Group
and included in the distribution in the file: LICENSE
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
If you did not receive a copy of the PHP license, or have any
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Build environment
OS: Linux - Linux login01.local 2.6.32-504.16.2.el6.x86_64 #1 SMP Wed Apr 22 06:48:29 UTC 2015 x86_64 Autoconf: autoconf (GNU Autoconf) 2.69 Copyright (C) 2012 Free Software Foundation, Inc. License GPLv3+/Autoconf: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>, <http://gnu.org/licenses/exceptions.html> This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Written by David J. MacKenzie and Akim Demaille. Bundled Libtool: ltmain.sh (GNU libtool) 1.5.26 (1.1220.2.492 2008/01/30 06:40:56) Copyright (C) 2008 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. System Libtool: libtool (GNU libtool) 2.4.6 Written by Gordon Matzigkeit, 1996 Copyright (C) 2014 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Compiler: 使用内建 specs。 COLLECT_GCC=cc COLLECT_LTO_WRAPPER=/mnt/ilustre/app/pub/gcc5/libexec/gcc/x86_64-unknown-linux-gnu/5.1.0/lto-wrapper 目标：x86_64-unknown-linux-gnu 配置为：/mnt/ilustre/app/renyi/gcc-5.1.0/configure --prefix=/mnt/ilustre/app/pub/gcc5/ --oldincludedir=/mnt/ilustre/app/pub/gcc5/include --enable-bootstrap --enable-shared --enable-threads=posix --disable-libstdcxx-pch --enable-languages=c,c++,objc,obj-c++,java,fortran --with-gmp=/mnt/ilustre/app/pub/gcc5/pre/ --with-mpfr=/mnt/ilustre/app/pub/gcc5/pre/ --with-mpc=/mnt/ilustre/app/pub/gcc5/pre/ --with-libelf=/mnt/ilustre/app/pub/gcc5/pre/ --with-cloog=/mnt/ilustre/app/pub/gcc5/pre/ --disable-multilib 线程模型：posix gcc 版本 5.1.0 (GCC) Bison: bison (GNU Bison) 2.4.1 Written by Robert Corbett and Richard Stallman. Copyright (C) 2008 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Libraries: linux-vdso.so.1 => (0x00007fff94a00000) libcrypt.so.1 => /lib64/libcrypt.so.1 (0x0000003fc1c00000) libresolv.so.2 => /lib64/libresolv.so.2 (0x0000003fb7000000) librt.so.1 => /lib64/librt.so.1 (0x0000003fb5400000) libm.so.6 => /lib64/libm.so.6 (0x0000003fb5800000) libdl.so.2 => /lib64/libdl.so.2 (0x0000003fb5000000) libnsl.so.1 => /lib64/libnsl.so.1 (0x0000003fc1800000) libz.so.1 => /mnt/ilustre/users/yun.ding/newmdt/bin/zlib/zlib-1.2.11//lib/libz.so.1 (0x00002b0c8dfa8000) libxml2.so.2 => /mnt/ilustre/users/yun.ding/newmdt/bin/libxml2/libxml2-2.9.8/lib/libxml2.so.2 (0x00002b0c8e1c8000) libc.so.6 => /lib64/libc.so.6 (0x0000003fb4800000) libfreebl3.so => /lib64/libfreebl3.so (0x0000003fc1400000) libpthread.so.0 => /lib64/libpthread.so.0 (0x0000003fb4c00000) /lib64/ld-linux-x86-64.so.2 (0x0000003fb4400000) User's E-mail: *** (truncated on purpose) ***